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Os03g0116200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
215.51 | 0.69 | 10.7 | -1.56 | 3.11 | 1.51 | 2.17 | 0.505 | -0.122 | 9.81 | 82.8 | 1093 | -- | -- |
215.58 | 0.684 | 10.7 | -1.56 | 3.16 | 1.58 | 2.15 | -- | -0.126 | 9.77 | 83.83 | 1046 | -- | -- |
231.02 | 0.708 | 10.7 | -1.58 | 3.15 | 1.58 | -- | -0.756 | -0.153 | 9.84 | 83.55 | 1022 | -- | -- |
231.89 | 0.709 | 10.7 | -1.48 | 3.18 | 1.57 | -- | -- | -0.135 | 9.82 | 85 | 1046 | -- | -- |
657.53 | 1.2 | 10.8 | -1.36 | -- | 1.61 | -- | -0.324 | -0.0854 | -- | 84 | 2990 | -- | -- |
261.46 | 0.758 | 10.7 | -1.37 | 2.77 | -- | 1.92 | -- | -0.167 | 9.57 | -- | -- | -- | -- |
275.1 | 0.777 | 10.7 | -1.3 | 2.76 | -- | -- | -- | -0.163 | 9.61 | -- | -- | -- | -- |
656.3 | 1.2 | 10.8 | -1.35 | -- | 1.6 | -- | -- | -0.0911 | -- | 85 | 1046 | -- | -- |
288.28 | 0.791 | 10.7 | -- | 3.15 | 1.48 | -- | -- | -0.0498 | 9.85 | 106.2 | 1039 | -- | -- |
724.76 | 1.26 | 10.8 | -1.32 | -- | -- | -- | -- | -0.157 | -- | -- | -- | -- | -- |
319.32 | 0.836 | 10.7 | -- | 2.76 | -- | -- | -- | -0.0189 | 9.65 | -- | -- | -- | -- |
704.54 | 1.24 | 10.8 | -- | -- | 1.57 | -- | -- | 0.0577 | -- | 85 | 1046 | -- | -- |
770.55 | 1.3 | 10.8 | -- | -- | -- | -- | -- | -0.0113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
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1 | 209.74 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
2 | 211.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 2 |
3 | 211.75 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
8 | 213.91 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 11 |
19 | 215.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 9 |
35 | 216.49 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 19 |
36 | 216.60 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 1 |
50 | 217.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
61 | 217.91 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 6 |
65 | 217.96 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 12 |
70 | 217.99 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 16 |
88 | 218.40 | humidity | 70 | 720 | > th | dose independent | sin | 15 | NA |
102 | 218.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
122 | 218.90 | humidity | 50 | 720 | > th | dose dependent | sin | 16 | NA |
285 | 221.15 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
297 | 221.25 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
324 | 221.46 | humidity | 80 | 720 | < th | dose independent | sin | 19 | NA |
349 | 221.70 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 22 |
350 | 221.70 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
361 | 221.79 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 7 |
373 | 221.90 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
377 | 221.93 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
398 | 222.14 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 1 |
399 | 222.14 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 3 |
411 | 222.24 | humidity | 90 | 720 | < th | dose dependent | sin | 15 | NA |
416 | 222.27 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 22 |
436 | 222.49 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 10 |
463 | 222.71 | humidity | 70 | 720 | < th | dose independent | sin | 14 | NA |
473 | 222.76 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
476 | 222.77 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 18 |
484 | 222.83 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 19 |
499 | 222.91 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 6 |
512 | 222.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 12 |
544 | 223.12 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 16 |
577 | 223.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
661 | 223.68 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |
669 | 223.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
729 | 224.00 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 6 |
744 | 224.07 | humidity | 90 | 720 | < th | dose dependent | rect. | 10 | 20 |
797 | 224.24 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 12 |
805 | 224.26 | humidity | 90 | 720 | < th | dose dependent | rect. | 10 | 18 |
894 | 224.56 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
918 | 224.63 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
939 | 224.69 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 23 |