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Os03g0114900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to putaive mitochondrial inner membrane protein [Oryza sativa (japonica cultivar-group)].


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.91 (0.0224) R2 : 0.564
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0537) R2dC : 0.553 R2C : 0.553
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.145 (0.0472) R2dN8 : 0.0117 R2N8 : 0.011
σ : 0.423
deviance : 81.71
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C
peak time of C : 13.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.99 0.401 9.92 0.265 0.704 -0.615 0.493 0.406 -0.156 13.6 20.95 79 -- --
73.17 0.398 9.92 0.269 0.737 -0.598 0.102 -- -0.152 13.5 23.35 76 -- --
73.38 0.399 9.93 0.287 0.744 -0.562 -- 0.119 -0.137 13.4 23.28 79 -- --
73.2 0.398 9.92 0.268 0.733 -0.603 -- -- -0.153 13.5 23.34 79 -- --
78.02 0.411 9.93 0.246 -- -1.11 -- 0.0556 -0.164 -- 13.32 136 -- --
79.29 0.417 9.9 0.294 1.3 -- 0.135 -- -0.112 13.1 -- -- -- --
79.36 0.417 9.9 0.298 1.3 -- -- -- -0.112 13.1 -- -- -- --
78.03 0.411 9.93 0.25 -- -1.11 -- -- -0.166 -- 13.31 136 -- --
75.09 0.404 9.93 -- 0.711 -0.624 -- -- -0.183 13.5 23.63 79 -- --
183.67 0.633 9.92 0.249 -- -- -- -- -0.137 -- -- -- -- --
81.71 0.423 9.91 -- 1.29 -- -- -- -0.145 13.1 -- -- -- --
79.64 0.416 9.94 -- -- -1.12 -- -- -0.196 -- 14.06 136 -- --
185.31 0.635 9.93 -- -- -- -- -- -0.165 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.29 humidity 50 720 > th dose dependent rect. 19 7
2 71.30 temperature 30 90 < th dose independent rect. 2 17
4 71.49 atmosphere 1005 30 > th dose independent rect. 17 15
9 71.60 atmosphere 1005 270 > th dose independent rect. 14 16
10 71.64 atmosphere 1005 30 > th dose independent rect. 15 17
11 71.66 temperature 30 270 < th dose independent rect. 24 18
20 71.85 humidity 60 720 > th dose dependent rect. 19 12
44 72.11 humidity 70 720 > th dose dependent rect. 15 16
68 72.27 humidity 90 720 < th dose dependent rect. 18 12
75 72.36 humidity 70 720 > th dose dependent sin 13 NA
130 72.66 radiation 20 90 < th dose dependent rect. 13 22
144 72.75 humidity 80 720 > th dose independent rect. 14 17
187 72.87 humidity 90 90 > th dose dependent rect. 20 6
216 72.98 temperature 30 10 < th dose independent rect. 2 14
238 73.04 temperature 30 270 < th dose independent rect. 10 9
266 73.12 radiation 20 90 < th dose dependent no NA NA
280 73.15 radiation 20 90 < th dose dependent rect. 15 23
299 73.23 radiation 10 90 < th dose independent rect. 13 22
319 73.26 radiation 20 90 < th dose dependent rect. 15 20
324 73.27 humidity 90 90 > th dose dependent rect. 10 16
341 73.32 humidity 80 720 < th dose independent rect. 16 14
383 73.38 radiation 20 90 < th dose dependent rect. 17 23
390 73.40 radiation 10 30 < th dose independent rect. 2 23
403 73.42 radiation 20 30 < th dose dependent rect. 9 23
432 73.47 humidity 90 90 > th dose independent rect. 20 6
453 73.50 radiation 20 30 < th dose independent rect. 2 14
458 73.51 radiation 10 90 < th dose independent no NA NA
462 73.51 radiation 20 90 < th dose dependent rect. 2 23
469 73.53 radiation 10 90 < th dose independent rect. 15 23
471 73.53 temperature 25 30 > th dose dependent rect. 7 10
479 73.55 wind 5 720 > th dose independent rect. 21 1
482 73.55 radiation 10 90 < th dose independent rect. 17 23
499 73.57 humidity 80 720 > th dose independent sin 14 NA
527 73.60 radiation 10 90 < th dose independent rect. 2 17
538 73.62 radiation 40 90 < th dose dependent sin 4 NA
560 73.65 humidity 80 720 > th dose independent rect. 14 12
574 73.67 radiation 20 10 < th dose independent rect. 2 12
609 73.70 radiation 10 30 < th dose independent rect. 9 23
617 73.70 temperature 25 90 > th dose dependent rect. 4 13
618 73.70 radiation 20 90 < th dose dependent rect. 2 17
625 73.72 radiation 10 90 > th dose independent no NA NA
626 73.72 radiation 10 90 > th dose independent rect. 6 12
706 73.72 radiation 40 90 < th dose dependent rect. 2 13
708 73.72 temperature 30 10 < th dose dependent rect. 2 14
709 73.72 temperature 30 90 < th dose dependent rect. 2 17
711 73.73 atmosphere 1005 270 > th dose independent rect. 23 8
754 73.76 radiation 10 90 < th dose independent rect. 2 19
763 73.77 humidity 90 720 > th dose independent rect. 23 1
775 73.78 radiation 20 30 < th dose independent sin 6 NA
776 73.78 atmosphere 1005 10 > th dose independent rect. 24 8
788 73.79 wind 7 720 < th dose independent rect. 16 5
790 73.79 temperature 25 30 > th dose dependent sin 2 NA
797 73.80 radiation 10 90 < th dose independent rect. 15 20
874 73.86 temperature 25 90 > th dose dependent rect. 19 22
884 73.88 radiation 10 90 < th dose independent rect. 7 23
897 73.89 radiation 10 14400 < th dose dependent rect. 22 5
904 73.89 radiation 20 90 < th dose dependent rect. 7 23
905 73.90 radiation 40 270 < th dose independent rect. 9 10
907 73.90 radiation 10 90 < th dose independent rect. 22 23
942 73.91 radiation 20 270 < th dose dependent rect. 22 21
943 73.91 radiation 1 90 > th dose dependent rect. 12 23
953 73.92 radiation 20 90 < th dose dependent rect. 22 23
954 73.93 humidity 80 720 < th dose independent sin 14 NA
970 73.94 atmosphere 1005 30 > th dose independent sin 12 NA
971 73.94 wind 1 90 < th dose independent rect. 24 1
979 73.94 radiation 40 270 < th dose dependent rect. 24 15
982 73.95 atmosphere 1005 270 < th dose independent rect. 23 2