Os03g0114800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF791 family protein.
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Os03g0114800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF791 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.19 | 0.556 | 10.2 | -1.21 | 3.17 | 2 | -1.93 | -2.69 | -0.268 | 22.6 | 10.62 | 264 | 1 | 15.9 |
| 144.04 | 0.559 | 10.2 | -0.931 | 3.13 | 2.04 | -0.59 | -- | -0.233 | 22.7 | 11.88 | 299 | 1.02 | 15.6 |
| 145.9 | 0.563 | 10.2 | -0.945 | 3.08 | 1.86 | -- | -0.328 | -0.227 | 22.6 | 11.14 | 269 | 0.983 | 15.9 |
| 145.4 | 0.562 | 10.2 | -0.916 | 3.16 | 2.05 | -- | -- | -0.221 | 22.7 | 11.84 | 302 | 0.974 | 15.5 |
| 175.28 | 0.617 | 10.2 | -1.44 | -- | 2.19 | -- | -2.19 | -0.397 | -- | -18.98 | 1127 | 8.04 | 8.72 |
| 184.22 | 0.636 | 10.1 | -0.635 | 2.11 | -- | -0.696 | -- | -0.024 | 21.7 | -- | -- | -- | -- |
| 186.05 | 0.639 | 10.1 | -0.608 | 2.12 | -- | -- | -- | -0.0224 | 21.7 | -- | -- | -- | -- |
| 167.28 | 0.602 | 10.1 | -0.787 | -- | 2.22 | -- | -- | -0.111 | -- | -53.22 | 1094 | 8.08 | 9.25 |
| 166.04 | 0.6 | 10.2 | -- | 3.14 | 1.9 | -- | -- | -0.0973 | 22.6 | 11.59 | 279 | 1.07 | 15.6 |
| 452.85 | 0.994 | 10.1 | -0.588 | -- | -- | -- | -- | -0.0253 | -- | -- | -- | -- | -- |
| 195.78 | 0.655 | 10.1 | -- | 2.12 | -- | -- | -- | 0.0453 | 21.7 | -- | -- | -- | -- |
| 183.26 | 0.631 | 10.1 | -- | -- | 2.2 | -- | -- | 0.00849 | -- | -61.71 | 1061 | 8.02 | 9.78 |
| 461.98 | 1 | 10.1 | -- | -- | -- | -- | -- | 0.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 2 | 140.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 6 | 141.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 10 | 142.18 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 71 | 147.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 74 | 147.58 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 80 | 147.93 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 91 | 148.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 103 | 148.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 113 | 148.82 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 119 | 148.94 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 122 | 149.04 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 129 | 149.16 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 138 | 149.28 | temperature | 30.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 147 | 149.47 | temperature | 15.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 150 | 149.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 189 | 150.33 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 205 | 150.73 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 223 | 150.98 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 226 | 151.04 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 236 | 151.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 238 | 151.18 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 329 | 152.03 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 351 | 152.24 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 367 | 152.45 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 383 | 152.57 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 406 | 152.81 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 412 | 152.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 427 | 153.03 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 440 | 153.12 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 446 | 153.18 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 456 | 153.22 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 458 | 153.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 460 | 153.23 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 463 | 153.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 466 | 153.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 493 | 153.46 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 515 | 153.62 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 519 | 153.67 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 538 | 153.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 541 | 153.77 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 544 | 153.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 545 | 153.77 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 547 | 153.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 552 | 153.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 553 | 153.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 559 | 153.80 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 566 | 153.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 599 | 154.01 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 607 | 154.06 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 3 |
| 615 | 154.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 616 | 154.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 617 | 154.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 8 |
| 618 | 154.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 8 |
| 620 | 154.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 623 | 154.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 639 | 154.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 22 |
| 655 | 154.33 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 656 | 154.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 658 | 154.33 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 677 | 154.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 683 | 154.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 693 | 154.45 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 699 | 154.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 702 | 154.48 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 703 | 154.50 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 709 | 154.52 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 726 | 154.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 727 | 154.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 745 | 154.71 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 770 | 154.80 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 800 | 154.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 21 |
| 805 | 154.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 815 | 154.99 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 816 | 154.99 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 829 | 155.04 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 832 | 155.05 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 854 | 155.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 856 | 155.11 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 5 |
| 870 | 155.17 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 871 | 155.17 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 875 | 155.17 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 878 | 155.17 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 879 | 155.17 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 881 | 155.17 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 885 | 155.17 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 14 |
| 886 | 155.17 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 903 | 155.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 8 |
| 906 | 155.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 909 | 155.22 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 912 | 155.22 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 913 | 155.22 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 915 | 155.22 | radiation | 20.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 918 | 155.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 926 | 155.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 929 | 155.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 933 | 155.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 938 | 155.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 939 | 155.24 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 940 | 155.24 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 944 | 155.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 951 | 155.25 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 986 | 155.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 987 | 155.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 16 |
| 989 | 155.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 990 | 155.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 993 | 155.34 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 994 | 155.34 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 8 |