BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0114800 Os03g0114800|AK065394
(457 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64650.1 | chr1:24023805-24026336 REVERSE LENGTH=463 790 0.0
AT4G27720.1 | chr4:13831203-13833521 FORWARD LENGTH=461 759 0.0
AT3G49310.1 | chr3:18285084-18287991 REVERSE LENGTH=461 754 0.0
AT2G23093.1 | chr2:9832193-9834416 FORWARD LENGTH=450 91 2e-18
>AT1G64650.1 | chr1:24023805-24026336 REVERSE LENGTH=463
Length = 462
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/462 (82%), Positives = 422/462 (91%), Gaps = 5/462 (1%)
Query: 1 MEVFYYLVFGGLAAVVAGLELGKSAKDRVTTSQAFNSFKNNYVLVYSLMMSGDWLQGPYV 60
ME+FY++VFGGLAA+VAGLEL KS KDR+ TS AFNSFKNNY+LVYSLMM+GDWLQGPYV
Sbjct: 1 MEIFYFVVFGGLAAIVAGLELSKSNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
Query: 61 YYLYSQYGFDKGDIGRLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCISYILSCITKH 120
YYLYS YGF KG+IG+LFIAGFGSSMLFGTIVGSLADKQGRKRA ITYCI+YILSCITKH
Sbjct: 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRASITYCITYILSCITKH 120
Query: 121 SPEYKILMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDSQWLSITFSKAIFLGNGLVAI 180
SP+YK+LM+GRVLGGIATSLLFSAFESWLVAEHNKRGF+ QWLS+TFSKAIFLGNGLVAI
Sbjct: 121 SPQYKVLMVGRVLGGIATSLLFSAFESWLVAEHNKRGFEQQWLSVTFSKAIFLGNGLVAI 180
Query: 181 VSGLFANLLADNLGFGPVAPFDAAACFLAIGMAIIMSSWSENYGDPSESKDLMSQFKVAA 240
++GLF N L D+L GPVAPFDAAACFLAIGMA+I+SSWSENYGDPSE+KDL++QFK AA
Sbjct: 181 IAGLFGNYLVDSLSLGPVAPFDAAACFLAIGMAVIISSWSENYGDPSENKDLLTQFKNAA 240
Query: 241 KAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFMLSSMLGSSI 300
AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFML+SMLGSSI
Sbjct: 241 SAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFMLASMLGSSI 300
Query: 301 AARLLARKL-KVEGYMQIVFTISAFTLFLPVVTNILVPTSSVKGGSISFGGTLQLLGFCT 359
A+RLLA KVE YMQIVF IS+ L LPVVT+ LV S VKGGSISF G +QL+GFCT
Sbjct: 301 ASRLLAHSSPKVESYMQIVFVISSAALMLPVVTSFLVAPSGVKGGSISFSGCIQLMGFCT 360
Query: 360 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNLFVCVVLYNVNAFPITVMFGMCS 419
FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNV+AFP+TVMFGMCS
Sbjct: 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCLVLYNVDAFPMTVMFGMCS 420
Query: 420 IFLFMAAILQRRLMVVSDLHKSSTK----AQEMVDEDEPLNP 457
+FLF+A+ILQRRLM V+++HKS ++ +EM E +PLNP
Sbjct: 421 VFLFVASILQRRLMNVAEIHKSRSQEWSAEKEMTSEADPLNP 462
>AT4G27720.1 | chr4:13831203-13833521 FORWARD LENGTH=461
Length = 460
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/459 (78%), Positives = 408/459 (88%), Gaps = 3/459 (0%)
Query: 1 MEVFYYLVFGGLAAVVAGLELGKSAKDRVTTSQAFNSFKNNYVLVYSLMMSGDWLQGPYV 60
ME+FYYLVFG L VVA LEL K+ KDR+ TS AFNSFKNNY+LVYSLMM+GDWLQGPYV
Sbjct: 1 MEIFYYLVFGVLGLVVAALELSKNNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
Query: 61 YYLYSQYGFDKGDIGRLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCISYILSCITKH 120
YYLYS YGF KGDIG+LFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYCI+YILSCITKH
Sbjct: 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH 120
Query: 121 SPEYKILMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDSQWLSITFSKAIFLGNGLVAI 180
SP+YK+LM+GRVLGGIATSLLFS+FESWLVAEHNKRGF+ QWLS+TFSKA+F GNGLVAI
Sbjct: 121 SPQYKVLMVGRVLGGIATSLLFSSFESWLVAEHNKRGFEQQWLSVTFSKAVFFGNGLVAI 180
Query: 181 VSGLFANLLADNLGFGPVAPFDAAACFLAIGMAIIMSSWSENYGDPSESKDLMSQFKVAA 240
++GLF NLL D GPVAPFDAAACFL IGMA+I+SSW+ENYGDPSE+KDL++QF+ AA
Sbjct: 181 IAGLFGNLLVDTFSLGPVAPFDAAACFLTIGMAVILSSWTENYGDPSENKDLLTQFRGAA 240
Query: 241 KAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFMLSSMLGSSI 300
AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN+E+IPHGFIFATFML+SMLGSS+
Sbjct: 241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 300
Query: 301 AARLLARKL-KVEGYMQIVFTISAFTLFLPVVTNILVPTSSVKGGSISFGGTLQLLGFCT 359
A+RLL+R KVE YMQIVF +S L LP++ + + S VKGG ISF G QLLGFC
Sbjct: 301 ASRLLSRSTPKVESYMQIVFLVSGAALLLPILMTLFIAPSKVKGGGISFSGCFQLLGFCI 360
Query: 360 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNLFVCVVLYNVNAFPITVMFGMCS 419
FEACVG+FWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVCVVLYNVNAFPITVMFGMCS
Sbjct: 361 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVNAFPITVMFGMCS 420
Query: 420 IFLFMAAILQRRLMVVSDLHKSS--TKAQEMVDEDEPLN 456
IFLF+A++LQRRLM++ D K++ T +E E++PLN
Sbjct: 421 IFLFVASLLQRRLMMIVDKPKTNDWTPLEERNTEEDPLN 459
>AT3G49310.1 | chr3:18285084-18287991 REVERSE LENGTH=461
Length = 460
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/459 (77%), Positives = 411/459 (89%), Gaps = 3/459 (0%)
Query: 1 MEVFYYLVFGGLAAVVAGLELGKSAKDRVTTSQAFNSFKNNYVLVYSLMMSGDWLQGPYV 60
MEVFYYLVFG +AAVVA LEL K+ KDR+ TS +FNSFKNNY+LV+S+MM+GDWLQGPYV
Sbjct: 1 MEVFYYLVFGVMAAVVAALELSKTNKDRINTSSSFNSFKNNYLLVFSIMMAGDWLQGPYV 60
Query: 61 YYLYSQYGFDKGDIGRLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCISYILSCITKH 120
YYLYS YGF KGDIG+LFIAGFGSSMLFGTIVGSLADKQGRKRAC+TYCI YILSCITKH
Sbjct: 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCIVYILSCITKH 120
Query: 121 SPEYKILMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDSQWLSITFSKAIFLGNGLVAI 180
SP+YK+LM+GR+LGGIATSLLFSAFESWL+AEHNKR F+ QWLS+TFSKA+FLGNGLVAI
Sbjct: 121 SPQYKVLMVGRILGGIATSLLFSAFESWLIAEHNKRNFEQQWLSLTFSKAVFLGNGLVAI 180
Query: 181 VSGLFANLLADNLGFGPVAPFDAAACFLAIGMAIIMSSWSENYGDPSESKDLMSQFKVAA 240
+SGLF NLL D FGPVAPFDAAACFLAIGMAII+ +WSEN+GDPS+SKDL++QFKVAA
Sbjct: 181 LSGLFGNLLVDTFSFGPVAPFDAAACFLAIGMAIILGTWSENFGDPSDSKDLLTQFKVAA 240
Query: 241 KAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFMLSSMLGSSI 300
AIASDEKIALLGAIQSLFE SMYTFVFLWTPALSPN+E+IPHGF+FATFML+SMLGSS+
Sbjct: 241 IAIASDEKIALLGAIQSLFEASMYTFVFLWTPALSPNDEEIPHGFVFATFMLASMLGSSL 300
Query: 301 AARLLAR-KLKVEGYMQIVFTISAFTLFLPVVTNILVPTSSVKGGSISFGGTLQLLGFCT 359
AARL++R L+VE YMQIVF +SA +L LP+ T++LV S VK +S ++QLLGFC
Sbjct: 301 AARLMSRSSLRVENYMQIVFLVSAASLLLPITTSVLVTPSKVKDEGLSLTSSIQLLGFCV 360
Query: 360 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNLFVCVVLYNVNAFPITVMFGMCS 419
FE+CVGIFWPSIMKMRSQYIPEEARSTIMNFFR+PLN+FVC+VLYNV+AFPIT+MFGMCS
Sbjct: 361 FESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCIVLYNVDAFPITIMFGMCS 420
Query: 420 IFLFMAAILQRRLMVVSDLHKSS--TKAQEMVDEDEPLN 456
IFLF+A+ILQRRLMV+S+ K+ + +E E +PL
Sbjct: 421 IFLFVASILQRRLMVISEKPKAEDWSPMKERNSEVDPLT 459
>AT2G23093.1 | chr2:9832193-9834416 FORWARD LENGTH=450
Length = 449
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 189/425 (44%), Gaps = 53/425 (12%)
Query: 25 AKDRV------TTSQAFNSFKNNYVLVYSLMMSGDWLQGPYVYYLYSQYGFDKGDIGRLF 78
AK+R + S +F F+ ++ +Y+L + L Y + YG K +
Sbjct: 35 AKNRTFGSFDHSISSSFARFQRWFLAIYTLSSVMEGLLSVYGELELTTYGLSKESMVFYL 94
Query: 79 IAGFGSSMLFGTIVGSLADKQGRKRACITYCISYILSCITKH---SPEYKILMIGRVLGG 135
G+ ++++ G ++G ++D G+K+ C+ YC+ +++ + K SP + L G
Sbjct: 95 CVGYSTALVLGPVLGVVSDLIGQKKICLLYCVLHLIVGVWKRITMSPSAWFANVFLSLAG 154
Query: 136 IATSLLFSAFESWLVAEHNKRGFDSQWLSITFSKAIFLGNGLVAIVSG-LFAN-LLADNL 193
+ S FE+WLV EH K+ + L+ TF FL + +++ G + AN L+ +N+
Sbjct: 155 LVYSF---GFETWLVVEHEKQSQRNDSLNETFWLMTFLESA--SLIGGQVLANWLVGENV 209
Query: 194 GFGPVAPFDAAACFLAIGMAIIMSSWSENYGDPSESKDLMSQFKVAAKAIASDEKIALLG 253
G +A A+ L++ I + + +P ++ + D++I LG
Sbjct: 210 QDG-IALSATASLLLSVVTIICI---VQTAKEPLKTLPFRDYSTAFYAYVLGDKRIWFLG 265
Query: 254 AIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFMLSSMLGSSIAARLLARK--LKV 311
Q+ + S F LW P + + ++ G I+ F+ S MLGS++ L++ + L++
Sbjct: 266 TSQACLQFSTAVFWILWAPTIVADGREVNLGLIYPCFLGSRMLGSTVFPWLMSGQSLLRL 325
Query: 312 E-------GYMQIVFTISAFTLFLPVVTNILVPTSSVKGGSISFGGTLQLLGFCTFEACV 364
E + IVF+I A+ + +L FC F
Sbjct: 326 EDCLVYIYALLGIVFSIVAYDYQEIRILVVL---------------------FCLFHGFA 364
Query: 365 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN---LFVCVVLYNVNAFPITVMFGMCSIF 421
G+ P + ++R+ Y+P E R +++ ++P N LF + N + M + +I
Sbjct: 365 GLALPLLARLRTMYVPNELRGGMISLSQVPANAAILFFLIQRGYSNKIENSTMMALGAIS 424
Query: 422 LFMAA 426
LF A+
Sbjct: 425 LFTAS 429
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,483,608
Number of extensions: 385669
Number of successful extensions: 1078
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1074
Number of HSP's successfully gapped: 4
Length of query: 457
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 355
Effective length of database: 8,310,137
Effective search space: 2950098635
Effective search space used: 2950098635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)