Os03g0112800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF726 family protein.
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Os03g0112800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF726 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.44 | 0.317 | 10.1 | 0.474 | 1.21 | 1.01 | -0.396 | 1.09 | 0.546 | 22 | 31.44 | 30 | -- | -- |
| 46.75 | 0.321 | 10 | 0.648 | 1.19 | 1.01 | -0.172 | -- | 0.59 | 22 | 31.44 | 30 | -- | -- |
| 46.01 | 0.316 | 10.1 | 0.504 | 1.23 | 1.01 | -- | 0.935 | 0.544 | 22 | 31.95 | 30 | -- | -- |
| 46.7 | 0.318 | 10 | 0.663 | 1.21 | 1.05 | -- | -- | 0.591 | 22 | 32.2 | 29 | -- | -- |
| 124.27 | 0.522 | 10 | 0.696 | -- | 1.67 | -- | 0.684 | 0.662 | -- | 31.95 | 30 | -- | -- |
| 59.53 | 0.362 | 10.1 | 0.425 | 1.37 | -- | -0.131 | -- | 0.417 | 22.8 | -- | -- | -- | -- |
| 59.6 | 0.362 | 10.1 | 0.43 | 1.37 | -- | -- | -- | 0.418 | 22.8 | -- | -- | -- | -- |
| 124.79 | 0.523 | 9.99 | 0.803 | -- | 1.68 | -- | -- | 0.692 | -- | 31.95 | 30 | -- | -- |
| 57.03 | 0.354 | 10.1 | -- | 1.24 | 0.753 | -- | -- | 0.474 | 22.3 | 32.2 | 29 | -- | -- |
| 176.25 | 0.62 | 10.1 | 0.459 | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
| 64.47 | 0.376 | 10.1 | -- | 1.38 | -- | -- | -- | 0.37 | 22.9 | -- | -- | -- | -- |
| 140.83 | 0.555 | 10 | -- | -- | 1.46 | -- | -- | 0.572 | -- | 31.95 | 30 | -- | -- |
| 181.8 | 0.629 | 10.1 | -- | -- | -- | -- | -- | 0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.52 | temperature | 20 | 90 | > th | dose dependent | sin | 8 | NA |
| 2 | 43.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 6 | 44.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 7 | 44.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 8 | 44.18 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 11 | 44.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 15 | 44.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 17 | 44.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 46 | 44.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 51 | 45.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 54 | 45.08 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 99 | 45.53 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 100 | 45.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 104 | 45.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 115 | 45.60 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 126 | 45.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 129 | 45.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 131 | 45.70 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 139 | 45.78 | temperature | 15 | 30 | > th | dose dependent | no | NA | NA |
| 145 | 45.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 166 | 45.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 185 | 46.08 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 187 | 46.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 188 | 46.10 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 229 | 46.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 234 | 46.37 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 237 | 46.40 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 20 |
| 290 | 46.67 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 312 | 46.81 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 325 | 46.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 370 | 47.04 | temperature | 25 | 270 | > th | dose independent | sin | 10 | NA |
| 373 | 47.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 424 | 47.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 426 | 47.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 437 | 47.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 461 | 47.39 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 498 | 47.49 | temperature | 25 | 270 | < th | dose independent | sin | 10 | NA |
| 502 | 47.51 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 11 |
| 573 | 47.68 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 19 |
| 590 | 47.73 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 611 | 47.78 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 618 | 47.79 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 653 | 47.86 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 681 | 47.95 | humidity | 50 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 688 | 47.97 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 721 | 48.05 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 794 | 48.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 19 |
| 795 | 48.20 | humidity | 60 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 839 | 48.26 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 13 |
| 853 | 48.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 954 | 48.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 964 | 48.43 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 11 |