Os03g0109600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor homolog BTF3-like protein.
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Os03g0109600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transcription factor homolog BTF3-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.11 | 0.245 | 13.4 | -0.187 | 1.07 | 0.479 | 0.122 | 0.864 | -0.24 | 19.9 | 5.824 | 10 | -- | -- |
| 28.39 | 0.248 | 13.4 | -0.167 | 1.07 | 0.472 | -0.21 | -- | -0.245 | 20 | 3.605 | 15 | -- | -- |
| 27.14 | 0.243 | 13.4 | -0.188 | 1.06 | 0.474 | -- | 0.808 | -0.239 | 19.9 | 5.999 | 9 | -- | -- |
| 28.52 | 0.249 | 13.4 | -0.161 | 1.07 | 0.471 | -- | -- | -0.245 | 20 | 3.702 | 15 | -- | -- |
| 50.82 | 0.332 | 13.4 | -0.209 | -- | 0.843 | -- | 0.531 | -0.383 | -- | 0.05963 | 800 | -- | -- |
| 31.69 | 0.264 | 13.4 | -0.157 | 0.992 | -- | -0.191 | -- | -0.238 | 19.1 | -- | -- | -- | -- |
| 31.79 | 0.264 | 13.4 | -0.153 | 0.992 | -- | -- | -- | -0.239 | 19.1 | -- | -- | -- | -- |
| 49.47 | 0.328 | 13.4 | -0.232 | -- | 0.967 | -- | -- | -0.359 | -- | -19.41 | 816 | -- | -- |
| 29.22 | 0.252 | 13.4 | -- | 1.08 | 0.469 | -- | -- | -0.241 | 19.9 | 3.313 | 15 | -- | -- |
| 83.62 | 0.427 | 13.4 | -0.173 | -- | -- | -- | -- | -0.256 | -- | -- | -- | -- | -- |
| 32.41 | 0.266 | 13.4 | -- | 0.993 | -- | -- | -- | -0.222 | 19.1 | -- | -- | -- | -- |
| 50.88 | 0.332 | 13.4 | -- | -- | 0.956 | -- | -- | -0.332 | -- | -13.88 | 813 | -- | -- |
| 84.41 | 0.429 | 13.4 | -- | -- | -- | -- | -- | -0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.16 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 3 | 18.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 4 | 18.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 18.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 8 | 18.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 9 | 18.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 12 | 18.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 13 | 18.38 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 15 | 18.38 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 18 | 18.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 19 | 18.38 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 23 | 18.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 25 | 18.66 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 26 | 18.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 27 | 18.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 29 | 18.76 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 30 | 18.78 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 31 | 18.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 35 | 18.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 36 | 18.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 38 | 18.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 40 | 18.93 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 41 | 18.93 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 43 | 18.93 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 44 | 18.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 45 | 18.93 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 46 | 18.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 47 | 18.95 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 57 | 19.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 58 | 19.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 59 | 19.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 61 | 19.06 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 67 | 19.10 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 78 | 19.17 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 95 | 19.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 96 | 19.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 101 | 19.22 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 102 | 19.22 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 111 | 19.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 114 | 19.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 118 | 19.34 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 120 | 19.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 125 | 19.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 172 | 19.69 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 197 | 19.80 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 229 | 20.01 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 261 | 20.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 19 |
| 262 | 20.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 283 | 20.23 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 285 | 20.23 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 286 | 20.23 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 288 | 20.23 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 289 | 20.23 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 290 | 20.23 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 310 | 20.29 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 357 | 20.42 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 358 | 20.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 362 | 20.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 364 | 20.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 365 | 20.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 367 | 20.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 388 | 20.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 416 | 20.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 420 | 20.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 456 | 20.67 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 461 | 20.68 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 471 | 20.72 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 485 | 20.80 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 19 |
| 491 | 20.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 494 | 20.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 497 | 20.84 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 499 | 20.85 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 507 | 20.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 510 | 20.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 512 | 20.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 514 | 20.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 515 | 20.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 516 | 20.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 517 | 20.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 532 | 20.90 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 545 | 20.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 590 | 20.99 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 658 | 21.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 662 | 21.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 664 | 21.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 670 | 21.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 680 | 21.19 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 699 | 21.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 707 | 21.22 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 731 | 21.26 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 735 | 21.27 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 741 | 21.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 745 | 21.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 746 | 21.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 755 | 21.29 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 756 | 21.29 | humidity | 50.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 779 | 21.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 801 | 21.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 6 |
| 804 | 21.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 6 |
| 842 | 21.43 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 844 | 21.43 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 845 | 21.43 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 846 | 21.43 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 6 |
| 849 | 21.43 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 860 | 21.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 862 | 21.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 882 | 21.48 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 883 | 21.48 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 884 | 21.48 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 903 | 21.49 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 913 | 21.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 919 | 21.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 921 | 21.51 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 944 | 21.53 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 977 | 21.55 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 979 | 21.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 999 | 21.56 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 5 |