Os03g0107600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0107600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.99 | 0.205 | 11.1 | -0.14 | 0.0134 | 0.511 | 0.416 | -0.249 | 0.128 | 1.32 | 21.2 | 752 | -- | -- |
| 19.16 | 0.204 | 11.1 | -0.0859 | 0.0255 | 0.525 | 0.376 | -- | 0.142 | 1.81 | 21.2 | 737 | -- | -- |
| 19.63 | 0.206 | 11.1 | -0.134 | 0.0251 | 0.501 | -- | -0.181 | 0.125 | 3.47 | 21.4 | 716 | -- | -- |
| 19.7 | 0.207 | 11.1 | -0.0862 | 0.0144 | 0.516 | -- | -- | 0.136 | 1.83 | 21.3 | 759 | -- | -- |
| 19.65 | 0.206 | 11.1 | -0.124 | -- | 0.509 | -- | -0.145 | 0.131 | -- | 21.35 | 761 | -- | -- |
| 28.66 | 0.251 | 11 | 0.109 | 0.0934 | -- | 0.258 | -- | 0.281 | 23.4 | -- | -- | -- | -- |
| 28.92 | 0.252 | 11 | 0.0997 | 0.0956 | -- | -- | -- | 0.281 | 22.5 | -- | -- | -- | -- |
| 19.71 | 0.207 | 11.1 | -0.0886 | -- | 0.517 | -- | -- | 0.138 | -- | 21.3 | 761 | -- | -- |
| 19.87 | 0.208 | 11.1 | -- | 0.0226 | 0.488 | -- | -- | 0.157 | 2.95 | 21.3 | 713 | -- | -- |
| 29.48 | 0.254 | 11 | 0.101 | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
| 29.18 | 0.253 | 11 | -- | 0.0962 | -- | -- | -- | 0.27 | 22.6 | -- | -- | -- | -- |
| 19.89 | 0.208 | 11.1 | -- | -- | 0.495 | -- | -- | 0.155 | -- | 21.33 | 752 | -- | -- |
| 29.75 | 0.255 | 11 | -- | -- | -- | -- | -- | 0.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.81 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 2 | 18.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 6 | 18.94 | temperature | 25 | 270 | < th | dose dependent | sin | 8 | NA |
| 30 | 19.11 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 57 | 19.25 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 61 | 19.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 88 | 19.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 89 | 19.37 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 90 | 19.37 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 96 | 19.39 | temperature | 15 | 720 | > th | dose dependent | sin | 12 | NA |
| 97 | 19.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 147 | 19.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 168 | 19.51 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 272 | 19.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 273 | 19.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 298 | 19.68 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 299 | 19.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 307 | 19.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 314 | 19.71 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 327 | 19.72 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 348 | 19.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 354 | 19.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 355 | 19.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 374 | 19.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 410 | 19.84 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 445 | 19.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 479 | 19.90 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 481 | 19.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 499 | 19.92 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 514 | 19.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 7 |
| 538 | 19.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 622 | 20.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 663 | 20.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 724 | 20.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 725 | 20.04 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 14 |
| 774 | 20.06 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 776 | 20.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 782 | 20.06 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 837 | 20.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 951 | 20.12 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 983 | 20.13 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 985 | 20.13 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 986 | 20.13 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 991 | 20.13 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |