FiT-DB / Search/ Help/ Sample detail

Os03g0106200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.78 (0.0284) R2 : 0.844
β1 : -1 (0.104) R2dD : 0.0325 R2D : 0.0304
β2 : 2.35 (0.0775) R2dC : 0.383 R2C : 0.593
β3 : 1.46 (0.0706) R2dE : 0.178 R2E : 0.391
β4 : 2.78 (0.288) R2dD*C : 0.0324 R2D*C : 0.0329
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.143 (0.0606) R2dN8 : 0.00254 R2N8 : -0.00412
σ : 0.53
deviance : 129.68
__
_____
C
peak time of C : 21
E
wheather : wind
threshold : 0.9261
memory length : 70
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 13.1
open length of G : 6.27

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
129.7 0.535 7.78 -0.989 2.35 1.48 2.72 0.238 -0.148 21 0.8426 72 13.1 6.18
129.68 0.53 7.78 -1 2.35 1.46 2.78 -- -0.143 21 0.9261 70 13.1 6.27
151.8 0.574 7.78 -1.06 2.31 1.49 -- 1.18 -0.141 20.9 0.9993 72 13.1 6.27
156.35 0.582 7.78 -1.09 2.32 1.48 -- -- -0.143 21 0.9561 70 13.1 6.3
273.05 0.77 7.8 -1.09 -- 2.45 -- -0.919 -0.245 -- -0.3626 310 12.3 7.95
196.29 0.657 7.8 -0.968 3.27 -- 2.92 -- -0.0858 19.8 -- -- -- --
220.63 0.696 7.79 -1.04 3.28 -- -- -- -0.0806 19.7 -- -- -- --
214.22 0.682 7.76 -1.01 -- 2.81 -- -- -0.283 -- -1.232 298 12 9.58
187.57 0.638 7.75 -- 2.34 1.44 -- -- -0.016 20.9 0.9761 64 13.1 6.3
800.46 1.32 7.71 -1.08 -- -- -- -- -0.128 -- -- -- -- --
249.23 0.738 7.77 -- 3.29 -- -- -- 0.0354 19.7 -- -- -- --
241.86 0.724 7.71 -- -- 2.87 -- -- -0.0765 -- -2.109 318 11.7 9.75
831.43 1.35 7.69 -- -- -- -- -- -0.0077 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 130.89 wind 1.0 90 > th dose independent rect. 13 6
2 131.21 precipitation 0.1 90 < th dose independent rect. 13 6
3 131.21 precipitation 0.1 90 < th dose dependent rect. 13 6
4 131.86 temperature 10.0 90 > th dose independent rect. 13 6
6 131.86 atmosphere 1010.0 90 < th dose independent rect. 13 6
8 131.86 temperature 10.0 90 > th dose independent rect. 19 18
9 131.86 atmosphere 995.0 90 > th dose independent rect. 19 18
10 131.99 wind 9.0 90 < th dose independent rect. 13 6
11 131.99 radiation 40.0 90 < th dose independent rect. 13 6
12 132.15 humidity 50.0 270 > th dose independent rect. 17 19
14 132.54 precipitation 0.1 90 < th dose independent rect. 19 18
15 132.54 precipitation 0.1 90 < th dose dependent rect. 19 18
17 133.00 wind 9.0 90 < th dose independent rect. 19 18
18 133.11 atmosphere 995.0 270 > th dose independent rect. 17 19
25 133.31 temperature 10.0 270 > th dose independent rect. 17 19
27 133.93 wind 9.0 270 < th dose independent rect. 17 19
28 134.10 precipitation 0.1 270 < th dose independent rect. 17 19
29 134.10 precipitation 0.1 270 < th dose dependent rect. 17 19
30 134.57 humidity 50.0 90 > th dose independent rect. 19 18
31 134.61 wind 1.0 270 > th dose independent rect. 11 7
32 134.70 precipitation 0.1 270 < th dose independent rect. 11 7
33 134.70 precipitation 0.1 270 < th dose dependent rect. 11 7
35 134.82 wind 9.0 270 < th dose independent rect. 11 7
36 134.86 temperature 15.0 270 > th dose independent rect. 11 7
40 135.09 atmosphere 1015.0 270 < th dose independent rect. 11 7
46 135.47 wind 1.0 270 > th dose independent rect. 13 3
52 135.84 temperature 30.0 270 < th dose independent rect. 17 18
59 136.04 wind 9.0 270 < th dose independent rect. 13 3
61 136.16 temperature 10.0 270 > th dose independent rect. 13 3
63 136.16 atmosphere 1010.0 270 < th dose independent rect. 13 3
65 136.16 temperature 10.0 270 > th dose independent rect. 16 21
70 136.22 atmosphere 995.0 90 > th dose independent rect. 13 6
95 137.31 humidity 90.0 270 < th dose independent rect. 12 5
100 137.99 atmosphere 995.0 270 > th dose independent rect. 13 3
106 138.06 radiation 1.0 270 > th dose independent rect. 12 5
112 138.64 temperature 10.0 1440 > th dose independent rect. 14 6
115 138.64 temperature 10.0 1440 > th dose independent rect. 20 18
118 138.64 atmosphere 995.0 1440 > th dose independent rect. 20 18
122 138.89 radiation 10.0 270 < th dose independent rect. 16 9
141 139.29 radiation 30.0 270 < th dose dependent rect. 16 9
142 139.30 wind 1.0 10 > th dose independent rect. 13 7
153 139.71 precipitation 0.1 10 < th dose independent rect. 20 17
154 139.71 precipitation 0.1 10 < th dose dependent rect. 20 17
164 140.04 humidity 70.0 270 > th dose independent rect. 22 9
165 140.09 radiation 20.0 270 < th dose independent rect. 22 9
166 140.13 temperature 15.0 10 > th dose independent rect. 20 17
168 140.15 temperature 10.0 10 > th dose independent rect. 13 7
170 140.15 atmosphere 1010.0 10 < th dose independent rect. 13 7
173 140.15 atmosphere 995.0 10 > th dose independent rect. 20 17
176 140.25 wind 9.0 270 < th dose independent rect. 22 9
177 140.26 temperature 10.0 270 > th dose independent rect. 22 9
178 140.26 temperature 30.0 270 < th dose independent rect. 22 9
179 140.26 humidity 50.0 270 > th dose independent rect. 22 9
181 140.26 atmosphere 995.0 270 > th dose independent rect. 22 9
183 140.26 temperature 10.0 270 > th dose independent rect. 7 15
189 140.49 temperature 10.0 270 > th dose dependent rect. 12 5
192 140.56 atmosphere 1015.0 90 < th dose independent rect. 19 18
211 140.88 wind 9.0 10 < th dose independent rect. 13 7
229 141.23 wind 9.0 10 < th dose independent rect. 20 17
241 141.33 radiation 40.0 10 < th dose dependent rect. 13 20
253 141.50 humidity 50.0 270 > th dose independent rect. 17 8
259 141.58 wind 9.0 270 < th dose independent rect. 7 15
282 141.71 wind 1.0 90 > th dose dependent rect. 13 6
288 141.81 wind 9.0 270 < th dose independent rect. 1 16
294 141.89 wind 1.0 270 > th dose independent rect. 17 8
299 142.00 humidity 50.0 270 > th dose independent rect. 13 3
301 142.06 temperature 10.0 270 > th dose dependent rect. 13 3
302 142.06 radiation 40.0 270 < th dose dependent rect. 22 9
304 142.09 temperature 10.0 270 > th dose independent rect. 17 8
308 142.09 temperature 10.0 270 > th dose independent rect. 1 16
309 142.09 atmosphere 1015.0 270 < th dose independent rect. 1 16
317 142.20 atmosphere 1015.0 90 < th dose dependent rect. 13 6
337 142.42 wind 9.0 270 < th dose independent rect. 17 8
344 142.47 atmosphere 995.0 270 > th dose independent rect. 17 8
347 142.50 humidity 50.0 10 > th dose independent rect. 20 17
358 142.72 temperature 30.0 270 < th dose independent rect. 17 7
384 143.08 precipitation 0.1 270 < th dose independent rect. 22 9
385 143.08 precipitation 0.1 270 < th dose dependent rect. 22 9
394 143.45 wind 1.0 90 > th dose independent rect. 19 18
395 143.45 atmosphere 1015.0 270 < th dose independent rect. 17 19
403 143.66 radiation 1.0 270 > th dose independent rect. 4 8
438 143.89 precipitation 0.1 270 < th dose independent rect. 1 16
440 143.89 precipitation 0.1 270 < th dose dependent rect. 1 16
441 143.95 radiation 20.0 10 < th dose independent rect. 2 17
444 143.98 precipitation 0.1 270 < th dose independent rect. 5 7
445 143.98 precipitation 0.1 270 < th dose dependent rect. 5 7
453 144.09 atmosphere 1015.0 270 < th dose independent rect. 7 15
462 144.17 temperature 10.0 270 > th dose independent rect. 5 7
463 144.17 atmosphere 995.0 270 > th dose independent rect. 5 7
464 144.17 atmosphere 1015.0 270 < th dose independent rect. 5 7
466 144.17 temperature 10.0 270 > th dose independent rect. 12 17
470 144.21 wind 9.0 270 < th dose independent rect. 12 17
483 144.30 atmosphere 995.0 10 > th dose independent rect. 13 7
484 144.33 humidity 50.0 270 > th dose independent rect. 6 6
505 144.54 humidity 50.0 270 > th dose dependent rect. 22 9
506 144.56 precipitation 0.1 270 < th dose independent rect. 17 7
507 144.56 precipitation 0.1 270 < th dose dependent rect. 17 7
508 144.59 wind 9.0 270 < th dose independent rect. 6 6
515 144.67 precipitation 0.1 270 < th dose independent rect. 7 15
516 144.67 precipitation 0.1 270 < th dose dependent rect. 7 15
520 144.71 humidity 50.0 90 > th dose independent rect. 13 6
530 144.77 wind 1.0 270 > th dose independent rect. 17 19
534 144.87 wind 1.0 270 > th dose dependent rect. 13 3
551 145.05 radiation 10.0 90 > th dose independent rect. 9 4
581 145.17 precipitation 0.1 270 < th dose independent rect. 12 18
582 145.17 precipitation 0.1 270 < th dose dependent rect. 12 18
608 145.34 atmosphere 995.0 270 > th dose independent rect. 24 17
645 145.65 humidity 50.0 270 > th dose independent rect. 7 4
652 145.72 radiation 40.0 90 < th dose independent rect. 13 20
653 145.73 atmosphere 995.0 270 > th dose dependent rect. 13 3
687 146.06 wind 9.0 270 < th dose independent rect. 11 20
691 146.12 precipitation 0.1 270 < th dose independent rect. 7 4
692 146.12 precipitation 0.1 270 < th dose dependent rect. 7 4
695 146.16 temperature 10.0 270 > th dose independent rect. 7 4
696 146.16 atmosphere 995.0 270 > th dose independent rect. 7 4
697 146.16 atmosphere 1015.0 270 < th dose independent rect. 7 4
698 146.16 temperature 10.0 270 > th dose independent rect. 11 20
702 146.18 atmosphere 1015.0 270 < th dose independent rect. 22 9
705 146.23 temperature 10.0 90 > th dose independent rect. 9 4
706 146.23 atmosphere 995.0 90 > th dose independent rect. 9 4
707 146.23 atmosphere 1015.0 90 < th dose independent rect. 9 4
708 146.23 precipitation 0.1 90 < th dose independent rect. 9 4
710 146.23 temperature 10.0 90 > th dose independent rect. 13 20
711 146.23 precipitation 0.1 90 < th dose dependent rect. 9 4
713 146.26 radiation 20.0 10 < th dose independent rect. 13 20
715 146.29 humidity 50.0 10 > th dose independent rect. 13 7
732 146.38 wind 9.0 270 < th dose independent rect. 7 4
746 146.51 atmosphere 1015.0 10 < th dose independent rect. 20 17
748 146.52 wind 9.0 90 < th dose independent rect. 13 20
754 146.63 atmosphere 995.0 90 > th dose dependent rect. 13 6
768 146.71 humidity 50.0 270 > th dose independent rect. 9 1
778 146.78 radiation 1.0 270 > th dose independent rect. 7 4
821 147.01 wind 9.0 90 < th dose independent rect. 9 4
823 147.02 temperature 10.0 270 > th dose independent rect. 9 1
824 147.02 atmosphere 995.0 270 > th dose independent rect. 9 1
825 147.02 atmosphere 1015.0 270 < th dose independent rect. 9 1
832 147.02 temperature 10.0 270 > th dose independent rect. 10 23
845 147.06 precipitation 0.1 270 < th dose independent rect. 9 1
846 147.06 precipitation 0.1 270 < th dose dependent rect. 9 1
847 147.07 temperature 20.0 270 > th dose independent rect. 9 1
849 147.10 wind 9.0 270 < th dose independent rect. 9 1
857 147.16 precipitation 0.1 90 < th dose independent rect. 13 20
859 147.16 precipitation 0.1 90 < th dose dependent rect. 13 20
904 147.37 precipitation 0.1 270 < th dose independent rect. 11 20
905 147.37 precipitation 0.1 270 < th dose dependent rect. 11 20
918 147.48 radiation 1.0 270 > th dose independent rect. 9 1
936 147.72 wind 9.0 270 < th dose independent rect. 10 23
940 147.78 atmosphere 995.0 270 > th dose independent rect. 7 15
948 147.82 wind 1.0 90 > th dose independent rect. 9 4
957 147.90 radiation 40.0 10 < th dose dependent rect. 13 6
959 147.94 radiation 40.0 90 < th dose independent rect. 13 18