Os02g0833100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0833100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.17 | 0.379 | 9.29 | 0.802 | 1.83 | -0.402 | -0.486 | -4.15 | -0.0453 | 22.3 | 0.7319 | 1462 | -- | -- |
| 73.69 | 0.4 | 9.35 | 0.492 | 1.91 | 0.292 | -0.522 | -- | -0.106 | 22.3 | 0.01007 | 4126 | -- | -- |
| 65.25 | 0.376 | 9.28 | 0.797 | 1.86 | -0.353 | -- | -4.33 | -0.0344 | 22.4 | 0.7211 | 1501 | -- | -- |
| 74.33 | 0.402 | 9.36 | 0.425 | 1.91 | 0.423 | -- | -- | -0.107 | 22.3 | 0.0622 | 5519 | -- | -- |
| 120.03 | 0.513 | 9.31 | 0.345 | -- | 1.22 | -- | -0.726 | -0.119 | -- | 2.702 | 1631 | -- | -- |
| 75.06 | 0.406 | 9.36 | 0.269 | 1.83 | -- | -0.713 | -- | -0.164 | 22.4 | -- | -- | -- | -- |
| 77.12 | 0.411 | 9.36 | 0.298 | 1.83 | -- | -- | -- | -0.162 | 22.3 | -- | -- | -- | -- |
| 121.87 | 0.516 | 9.3 | 0.321 | -- | 1.23 | -- | -- | -0.107 | -- | 3.888 | 33424 | -- | -- |
| 78.79 | 0.413 | 9.38 | -- | 1.92 | 0.31 | -- | -- | -0.169 | 22.3 | 0.1687 | 5307 | -- | -- |
| 281.81 | 0.784 | 9.31 | 0.327 | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
| 79.46 | 0.417 | 9.37 | -- | 1.83 | -- | -- | -- | -0.195 | 22.4 | -- | -- | -- | -- |
| 120.83 | 0.514 | 9.31 | -- | -- | 1.26 | -- | -- | -0.137 | -- | 5.31 | 15447 | -- | -- |
| 284.64 | 0.787 | 9.32 | -- | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 2 | 62.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 3 | 62.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 4 | 62.95 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 5 | 63.07 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 21 |
| 10 | 63.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 12 | 63.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 13 | 63.43 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 14 | 63.44 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 19 |
| 20 | 63.64 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 23 | 63.75 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 24 | 63.76 | humidity | 90.0 | 90 | > th | dose independent | sin | 5 | NA |
| 29 | 63.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 31 | 63.88 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 44 | 64.06 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 47 | 64.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 16 |
| 49 | 64.12 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 11 |
| 62 | 64.25 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 69 | 64.33 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 78 | 64.38 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 79 | 64.38 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 16 |
| 84 | 64.40 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 20 |
| 85 | 64.41 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 87 | 64.47 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 92 | 64.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 93 | 64.49 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 104 | 64.56 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 106 | 64.57 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 109 | 64.59 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 11 |
| 116 | 64.62 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 128 | 64.67 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 22 |
| 129 | 64.67 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 15 |
| 130 | 64.67 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 137 | 64.71 | humidity | 50.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 138 | 64.71 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 148 | 64.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 152 | 64.78 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 157 | 64.80 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 164 | 64.82 | radiation | 1.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 165 | 64.82 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 10 |
| 168 | 64.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 170 | 64.83 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 173 | 64.83 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 20 |
| 178 | 64.84 | humidity | 80.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 182 | 64.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 184 | 64.85 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 12 |
| 186 | 64.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 194 | 64.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 212 | 64.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 213 | 64.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 224 | 64.93 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 231 | 64.96 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 236 | 64.97 | humidity | 50.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 241 | 64.98 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 243 | 64.98 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 244 | 64.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 253 | 65.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 262 | 65.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 278 | 65.06 | wind | 9.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 279 | 65.06 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 7 |
| 288 | 65.08 | humidity | 90.0 | 90 | < th | dose independent | sin | 4 | NA |
| 302 | 65.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 303 | 65.10 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 10 |
| 309 | 65.12 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 322 | 65.13 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 12 |
| 331 | 65.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 363 | 65.20 | radiation | 1.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 379 | 65.22 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 13 |
| 394 | 65.25 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 409 | 65.27 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 411 | 65.27 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 9 |
| 437 | 65.31 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 16 |
| 463 | 65.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 10 |
| 471 | 65.37 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 480 | 65.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 484 | 65.39 | humidity | 80.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 506 | 65.43 | wind | 9.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 554 | 65.50 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 556 | 65.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 19 |
| 563 | 65.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 577 | 65.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 580 | 65.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 603 | 65.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 625 | 65.54 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 687 | 65.61 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 702 | 65.62 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 706 | 65.63 | wind | 1.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 724 | 65.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 733 | 65.66 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 747 | 65.67 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 749 | 65.68 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 755 | 65.69 | wind | 9.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 766 | 65.70 | humidity | 60.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 778 | 65.73 | wind | 1.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 787 | 65.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 809 | 65.78 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 830 | 65.81 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 831 | 65.81 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 836 | 65.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 846 | 65.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 859 | 65.83 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 869 | 65.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 891 | 65.86 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 894 | 65.86 | humidity | 90.0 | 90 | > th | dose independent | rect. | 21 | 19 |
| 920 | 65.88 | humidity | 90.0 | 90 | > th | dose independent | rect. | 19 | 21 |
| 951 | 65.91 | wind | 7.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 956 | 65.91 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 22 |
| 979 | 65.93 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 12 |