Os02g0832800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase (EC 2.4.1.101).
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Os02g0832800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase (EC 2.4.1.101).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.71 | 0.203 | 11.4 | -0.272 | 0.478 | 0.195 | 0.147 | 1.28 | 0.244 | 2.61 | 0.08669 | 5383 | -- | -- |
| 19.59 | 0.206 | 11.4 | -0.158 | 0.493 | 0.359 | 0.151 | -- | 0.3 | 2.76 | -0.03249 | 13831 | -- | -- |
| 18.77 | 0.202 | 11.4 | -0.277 | 0.475 | 0.206 | -- | 1.25 | 0.245 | 2.62 | -2.398e-05 | 5382 | -- | -- |
| 19.02 | 0.203 | 11.4 | -0.309 | 0.494 | 0.448 | -- | -- | 0.264 | 2.83 | 0.4422 | 17367 | -- | -- |
| 32.15 | 0.264 | 11.4 | -0.257 | -- | 0.163 | -- | 1.49 | 0.243 | -- | 0.1079 | 5369 | -- | -- |
| 23.26 | 0.226 | 11.4 | -0.14 | 0.488 | -- | 0.216 | -- | 0.216 | 2.63 | -- | -- | -- | -- |
| 23.42 | 0.227 | 11.4 | -0.145 | 0.489 | -- | -- | -- | 0.215 | 2.62 | -- | -- | -- | -- |
| 32.49 | 0.265 | 11.4 | -0.283 | -- | 0.524 | -- | -- | 0.248 | -- | 0.5312 | 2598 | -- | -- |
| 20.45 | 0.211 | 11.4 | -- | 0.492 | 0.353 | -- | -- | 0.311 | 2.58 | 0.209 | 16939 | -- | -- |
| 37.38 | 0.286 | 11.4 | -0.124 | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
| 23.98 | 0.229 | 11.4 | -- | 0.486 | -- | -- | -- | 0.231 | 2.62 | -- | -- | -- | -- |
| 34.25 | 0.273 | 11.4 | -- | -- | 0.415 | -- | -- | 0.278 | -- | 0.5 | 2598 | -- | -- |
| 37.79 | 0.287 | 11.4 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.30 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 2 | 18.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 3 | 18.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 5 | 18.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 29 | 18.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 31 | 18.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 33 | 18.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 36 | 18.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 9 |
| 44 | 18.53 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 45 | 18.53 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 46 | 18.53 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 47 | 18.53 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 53 | 18.53 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 54 | 18.53 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 59 | 18.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 84 | 18.58 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 103 | 18.60 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 121 | 18.62 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 128 | 18.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 136 | 18.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 141 | 18.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 146 | 18.68 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 164 | 18.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 171 | 18.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 193 | 18.71 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 194 | 18.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 197 | 18.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 12 |
| 239 | 18.76 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 328 | 18.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 358 | 18.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 367 | 18.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 380 | 18.86 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 389 | 18.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 513 | 18.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 522 | 18.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 535 | 18.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 550 | 18.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 557 | 18.96 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 564 | 18.97 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 565 | 18.97 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 585 | 18.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 606 | 18.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 623 | 19.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 678 | 19.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 689 | 19.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 705 | 19.05 | temperature | 30.0 | 270 | < th | dose independent | sin | 1 | NA |
| 745 | 19.06 | temperature | 30.0 | 270 | > th | dose independent | rect. | 18 | 22 |
| 746 | 19.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 831 | 19.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 852 | 19.11 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 891 | 19.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 902 | 19.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 912 | 19.14 | temperature | 30.0 | 270 | > th | dose independent | sin | 1 | NA |
| 914 | 19.14 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 929 | 19.14 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 954 | 19.15 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 965 | 19.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 22 |
| 966 | 19.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 986 | 19.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 990 | 19.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 993 | 19.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 996 | 19.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 999 | 19.17 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 9 |