Os02g0831200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF177 family protein.
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Os02g0831200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF177 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.31 | 0.444 | 10.6 | 0.706 | 1.91 | 0.484 | -1.3 | -1.04 | -0.476 | 20.1 | 19.9 | 70 | -- | -- |
| 94.25 | 0.452 | 10.6 | 0.575 | 1.91 | 0.559 | -1.37 | -- | -0.503 | 20 | 20.17 | 65 | -- | -- |
| 93.93 | 0.451 | 10.5 | 0.762 | 1.89 | 0.497 | -- | -1.26 | -0.468 | 20.1 | 19.4 | 60 | -- | -- |
| 99.64 | 0.468 | 10.6 | 0.598 | 1.91 | 0.612 | -- | -- | -0.514 | 20.1 | 19.5 | 57 | -- | -- |
| 290.06 | 0.793 | 10.5 | 0.838 | -- | 0.684 | -- | -1.3 | -0.467 | -- | 19.34 | 45 | -- | -- |
| 105.67 | 0.482 | 10.6 | 0.38 | 1.93 | -- | -1.47 | -- | -0.61 | 20.3 | -- | -- | -- | -- |
| 112.37 | 0.496 | 10.6 | 0.424 | 1.93 | -- | -- | -- | -0.611 | 20.3 | -- | -- | -- | -- |
| 295.86 | 0.805 | 10.5 | 0.662 | -- | 0.864 | -- | -- | -0.512 | -- | 19.2 | 44 | -- | -- |
| 108.43 | 0.485 | 10.6 | -- | 1.91 | 0.505 | -- | -- | -0.597 | 20.1 | 20.2 | 60 | -- | -- |
| 319.58 | 0.835 | 10.6 | 0.412 | -- | -- | -- | -- | -0.632 | -- | -- | -- | -- | -- |
| 117.12 | 0.506 | 10.6 | -- | 1.93 | -- | -- | -- | -0.658 | 20.3 | -- | -- | -- | -- |
| 305.87 | 0.817 | 10.5 | -- | -- | 0.63 | -- | -- | -0.582 | -- | 20.2 | 60 | -- | -- |
| 324.05 | 0.84 | 10.6 | -- | -- | -- | -- | -- | -0.678 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.86 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 2 | 85.09 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 22 | 86.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 30 | 86.92 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 31 | 86.97 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 41 | 87.23 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 45 | 87.28 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 49 | 87.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 53 | 87.39 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 55 | 87.41 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 56 | 87.42 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 60 | 87.45 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 62 | 87.46 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 63 | 87.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 64 | 87.47 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 71 | 87.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 73 | 87.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 80 | 87.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 90 | 87.64 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 91 | 87.65 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 95 | 87.68 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 97 | 87.69 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 98 | 87.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 108 | 87.75 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 121 | 87.78 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 133 | 87.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 141 | 87.86 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 143 | 87.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 146 | 87.88 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 147 | 87.88 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 166 | 87.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 170 | 87.95 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 192 | 88.02 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 222 | 88.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 254 | 88.18 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 261 | 88.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 360 | 88.39 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 376 | 88.42 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 390 | 88.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 414 | 88.52 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 432 | 88.56 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 436 | 88.57 | temperature | 20.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 446 | 88.58 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 489 | 88.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 490 | 88.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 494 | 88.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 593 | 88.79 | wind | 7.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 635 | 88.86 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 643 | 88.87 | wind | 9.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 657 | 88.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 664 | 88.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 680 | 88.93 | wind | 7.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 710 | 88.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 736 | 89.02 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 14 |
| 772 | 89.06 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 792 | 89.09 | temperature | 20.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 800 | 89.09 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 818 | 89.11 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 819 | 89.11 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 827 | 89.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 849 | 89.15 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 866 | 89.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 869 | 89.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 897 | 89.20 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 900 | 89.20 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 920 | 89.22 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 950 | 89.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 951 | 89.25 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 987 | 89.28 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |