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Os02g0830900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.62 (0.0207) R2 : 0.0083
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0853 (0.0437) R2dN8 : 0.0107 R2N8 : 0.0083
σ : 0.391
deviance : 70.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.78 0.293 9.55 0.877 0.532 0.487 -0.24 -1.05 0.278 7.47 24.7 14 -- --
40.5 0.299 9.57 0.728 0.542 0.613 -0.13 -- 0.234 7.53 23.7 6 -- --
38.92 0.291 9.55 0.87 0.528 0.504 -- -1.01 0.279 7.57 24.6 13 -- --
40.49 0.296 9.57 0.733 0.541 0.627 -- -- 0.238 7.63 23.7 13 -- --
51.95 0.336 9.55 0.963 -- 0.54 -- -1.24 0.328 -- 26.7 191 -- --
45.44 0.316 9.59 0.597 0.531 -- -0.423 -- 0.14 6.61 -- -- -- --
45.78 0.317 9.59 0.592 0.53 -- -- -- 0.142 6.91 -- -- -- --
54.12 0.343 9.57 0.751 -- 0.607 -- -- 0.283 -- 26.39 232 -- --
53.23 0.342 9.6 -- 0.541 0.366 -- -- 0.116 7.22 23 6 -- --
60.5 0.363 9.6 0.603 -- -- -- -- 0.152 -- -- -- -- --
55.01 0.347 9.61 -- 0.537 -- -- -- 0.0763 6.84 -- -- -- --
67.82 0.384 9.6 -- -- 0.353 -- -- 0.153 -- 26.3 183 -- --
70.09 0.391 9.62 -- -- -- -- -- 0.0853 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.72 temperature 10.0 270 > th dose dependent rect. 17 10
3 32.34 temperature 15.0 10 > th dose dependent rect. 20 9
17 33.71 temperature 30.0 270 < th dose dependent rect. 15 15
19 33.77 temperature 30.0 30 < th dose dependent rect. 16 17
50 34.55 temperature 25.0 270 < th dose independent rect. 16 14
51 34.58 temperature 20.0 10 > th dose independent rect. 20 9
70 34.82 temperature 30.0 270 < th dose dependent rect. 21 10
132 35.55 temperature 20.0 90 > th dose independent rect. 8 20
148 35.65 temperature 20.0 10 > th dose independent rect. 9 20
150 35.67 temperature 10.0 10 > th dose dependent rect. 9 20
153 35.69 radiation 1.0 720 < th dose dependent rect. 17 7
163 35.73 temperature 25.0 720 < th dose independent rect. 16 7
232 36.12 temperature 25.0 90 < th dose dependent sin 9 NA
239 36.14 atmosphere 1010.0 10 < th dose independent rect. 20 9
241 36.15 temperature 15.0 270 > th dose independent rect. 6 21
252 36.18 radiation 10.0 270 < th dose independent rect. 17 10
256 36.19 temperature 25.0 720 > th dose independent rect. 17 1
262 36.21 temperature 10.0 270 > th dose independent rect. 17 10
266 36.21 temperature 10.0 270 > th dose independent rect. 3 14
267 36.21 atmosphere 1015.0 270 < th dose independent rect. 3 14
271 36.23 wind 9.0 270 < th dose independent rect. 17 10
303 36.36 temperature 25.0 720 < th dose independent sin 16 NA
305 36.36 radiation 10.0 270 < th dose independent rect. 15 12
314 36.38 precipitation 0.1 270 < th dose independent rect. 3 14
316 36.38 precipitation 0.1 270 < th dose dependent rect. 3 14
317 36.39 atmosphere 995.0 270 > th dose independent rect. 17 10
320 36.40 atmosphere 1010.0 30 < th dose independent rect. 18 11
323 36.41 precipitation 0.1 270 < th dose independent rect. 17 10
326 36.41 precipitation 0.1 270 < th dose dependent rect. 17 10
338 36.45 wind 9.0 270 < th dose independent rect. 3 14
345 36.47 radiation 40.0 270 < th dose dependent rect. 17 10
375 36.56 atmosphere 1015.0 270 < th dose independent rect. 17 10
377 36.57 temperature 25.0 720 > th dose independent rect. 16 3
380 36.58 radiation 1.0 10 < th dose dependent sin 11 NA
427 36.70 temperature 30.0 270 < th dose dependent rect. 3 3
433 36.72 humidity 50.0 270 > th dose independent rect. 17 10
444 36.73 temperature 20.0 10 > th dose dependent rect. 23 6
469 36.77 humidity 60.0 10 > th dose independent rect. 18 11
474 36.78 temperature 30.0 270 < th dose independent rect. 6 8
483 36.79 temperature 30.0 270 < th dose dependent rect. 1 6
499 36.81 radiation 1.0 10 < th dose dependent rect. 18 11
514 36.85 radiation 1.0 30 < th dose independent rect. 18 11
547 36.91 radiation 1.0 10 < th dose independent sin 11 NA
577 36.97 wind 9.0 270 < th dose independent rect. 3 3
578 36.97 temperature 10.0 270 > th dose independent rect. 3 3
580 36.97 temperature 30.0 270 < th dose independent rect. 3 3
581 36.97 humidity 50.0 270 > th dose independent rect. 3 3
584 36.97 atmosphere 995.0 270 > th dose independent rect. 3 3
585 36.97 atmosphere 1015.0 270 < th dose independent rect. 3 3
586 36.97 radiation 20.0 270 < th dose independent rect. 3 3
614 37.01 wind 9.0 10 < th dose dependent rect. 18 11
626 37.03 atmosphere 1015.0 270 < th dose independent rect. 6 21
630 37.04 radiation 1.0 720 > th dose independent rect. 17 1
640 37.05 atmosphere 995.0 30 > th dose independent rect. 18 11
644 37.05 temperature 10.0 30 > th dose independent rect. 5 13
646 37.05 atmosphere 1015.0 30 < th dose independent rect. 5 13
649 37.05 atmosphere 1015.0 270 < th dose independent rect. 7 19
656 37.06 radiation 1.0 720 < th dose independent rect. 16 8
659 37.06 temperature 20.0 270 > th dose dependent rect. 23 2
665 37.07 precipitation 0.1 270 < th dose independent rect. 3 3
667 37.07 precipitation 0.1 270 < th dose dependent rect. 3 3
673 37.08 wind 9.0 30 < th dose independent rect. 18 11
682 37.09 radiation 40.0 270 < th dose dependent rect. 3 3
704 37.13 precipitation 0.1 270 < th dose independent rect. 6 21
708 37.13 precipitation 0.1 270 < th dose dependent rect. 6 21
732 37.16 precipitation 0.1 30 < th dose independent rect. 5 13
739 37.16 precipitation 0.1 30 < th dose dependent rect. 5 13
747 37.18 radiation 1.0 270 < th dose independent rect. 3 10
756 37.19 radiation 1.0 270 < th dose independent rect. 3 8
761 37.20 temperature 30.0 30 < th dose independent rect. 18 11
762 37.20 wind 9.0 30 < th dose independent rect. 5 13
763 37.20 humidity 50.0 270 > th dose dependent rect. 3 3
765 37.20 radiation 1.0 720 < th dose dependent rect. 7 17
769 37.21 atmosphere 995.0 270 > th dose independent rect. 3 14
786 37.23 wind 9.0 270 < th dose independent rect. 6 21
819 37.27 atmosphere 1000.0 270 > th dose independent rect. 6 21
832 37.29 humidity 50.0 10 > th dose dependent rect. 18 11
841 37.31 temperature 30.0 720 < th dose dependent rect. 19 3
880 37.36 precipitation 0.1 30 < th dose independent rect. 5 15
885 37.36 precipitation 0.1 30 < th dose dependent rect. 5 15
888 37.37 temperature 30.0 10 < th dose independent rect. 20 9
889 37.37 humidity 50.0 10 > th dose independent rect. 20 9
893 37.37 atmosphere 995.0 10 > th dose independent rect. 20 9
894 37.37 radiation 1.0 10 < th dose independent rect. 20 9
899 37.37 temperature 10.0 10 > th dose independent rect. 5 15
901 37.37 atmosphere 1015.0 10 < th dose independent rect. 5 15
908 37.37 radiation 10.0 10 < th dose dependent rect. 20 9
915 37.38 wind 9.0 10 < th dose independent rect. 20 9
927 37.39 atmosphere 995.0 90 > th dose independent rect. 19 9
956 37.40 wind 9.0 10 < th dose dependent rect. 9 20
959 37.41 wind 9.0 90 < th dose independent rect. 19 9
972 37.42 humidity 50.0 270 > th dose independent rect. 3 14
978 37.43 precipitation 0.1 10 < th dose independent rect. 18 11
984 37.43 precipitation 0.1 10 < th dose dependent rect. 18 11