Os02g0828900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0828900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.78 | 0.679 | 6.62 | 0.416 | 0.355 | -3.53 | -3.88 | -4.62 | 0.262 | 15 | 29.11 | 728 | 7.74 | -- |
| 225.75 | 0.7 | 6.68 | -0.101 | 0.00846 | -3.77 | -2.77 | -- | 0.225 | 12.4 | 32.3 | 809 | 8.67 | -- |
| 243.82 | 0.727 | 6.67 | -0.00311 | 0.632 | -3.73 | -- | -2.41 | 0.136 | 11.9 | 29.32 | 708 | 6.43 | -- |
| 243.9 | 0.727 | 6.72 | -0.391 | 0.264 | -3.92 | -- | -- | 0.0304 | 6.87 | 29.28 | 593 | 6.42 | -- |
| 246.77 | 0.732 | 6.7 | -0.176 | -- | -3.78 | -- | -1.76 | 0.0269 | -- | 28.28 | 579 | 6.48 | -- |
| 377.9 | 0.911 | 6.6 | 0.369 | 1.38 | -- | -2.4 | -- | 0.629 | 16.5 | -- | -- | -- | -- |
| 390.17 | 0.925 | 6.61 | 0.349 | 1.4 | -- | -- | -- | 0.616 | 17.2 | -- | -- | -- | -- |
| 244.58 | 0.728 | 6.72 | -0.339 | -- | -3.66 | -- | -- | 0.037 | -- | 28.58 | 579 | 6.56 | -- |
| 246.9 | 0.732 | 6.7 | -- | 0.32 | -3.83 | -- | -- | 0.097 | 7.08 | 29.71 | 591 | 6.31 | -- |
| 492.12 | 1.04 | 6.6 | 0.3 | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
| 393.38 | 0.928 | 6.62 | -- | 1.39 | -- | -- | -- | 0.577 | 17.2 | -- | -- | -- | -- |
| 247.26 | 0.732 | 6.71 | -- | -- | -3.52 | -- | -- | 0.0709 | -- | 28.41 | 546 | 6.21 | -- |
| 494.49 | 1.04 | 6.61 | -- | -- | -- | -- | -- | 0.548 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 2 | 208.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 5 | 209.82 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 9 | 212.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 10 | 212.59 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 12 | 212.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 14 | 212.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 21 | 214.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 48 | 216.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 52 | 216.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 68 | 218.01 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 18 |
| 216 | 224.98 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 246 | 225.97 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 251 | 226.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 265 | 226.40 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 279 | 226.79 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 291 | 227.06 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 296 | 227.25 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 333 | 227.92 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 17 |
| 433 | 229.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 459 | 229.76 | temperature | 25 | 720 | < th | dose independent | sin | 13 | NA |
| 495 | 230.18 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 637 | 231.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 667 | 232.12 | temperature | 20 | 14400 | < th | dose dependent | rect. | 15 | 14 |
| 685 | 232.26 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 728 | 232.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 772 | 232.75 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 791 | 232.85 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 793 | 232.86 | temperature | 25 | 720 | > th | dose independent | sin | 14 | NA |
| 794 | 232.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 802 | 232.90 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 805 | 232.92 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 14 |
| 807 | 232.93 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 16 |
| 815 | 232.96 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 19 |
| 824 | 233.02 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 828 | 233.03 | temperature | 20 | 14400 | < th | dose dependent | sin | 14 | NA |
| 844 | 233.10 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 964 | 233.86 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 3 |