Os02g0828100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0828100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.58 | 0.435 | 9.17 | -0.59 | 0.626 | 1.23 | 0.208 | -2.82 | 0.337 | 6.01 | 33.1 | 1096 | -- | -- |
| 86.09 | 0.432 | 9.14 | -0.166 | 0.588 | 0.916 | 0.146 | -- | 0.336 | 5.99 | 33.43 | 1095 | -- | -- |
| 85.67 | 0.431 | 9.17 | -0.61 | 0.627 | 1.25 | -- | -2.98 | 0.336 | 6.02 | 33.21 | 1095 | -- | -- |
| 85.93 | 0.432 | 9.12 | -0.153 | 0.618 | 0.911 | -- | -- | 0.334 | 6.02 | 33.5 | 1093 | -- | -- |
| 105.78 | 0.479 | 9.18 | -0.517 | -- | 1.22 | -- | -2.51 | 0.357 | -- | 33.4 | 1116 | -- | -- |
| 125.1 | 0.524 | 9.16 | 0.0501 | 0.668 | -- | 0.405 | -- | 0.181 | 5.19 | -- | -- | -- | -- |
| 125.5 | 0.525 | 9.16 | 0.0505 | 0.671 | -- | -- | -- | 0.179 | 5.26 | -- | -- | -- | -- |
| 105.79 | 0.479 | 9.13 | -0.148 | -- | 0.933 | -- | -- | 0.351 | -- | 33.5 | 1133 | -- | -- |
| 86.54 | 0.433 | 9.12 | -- | 0.619 | 0.892 | -- | -- | 0.346 | 6.02 | 33.49 | 1087 | -- | -- |
| 149.02 | 0.57 | 9.17 | 0.0738 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 125.57 | 0.524 | 9.16 | -- | 0.672 | -- | -- | -- | 0.174 | 5.26 | -- | -- | -- | -- |
| 106.32 | 0.48 | 9.13 | -- | -- | 0.919 | -- | -- | 0.364 | -- | 33.43 | 1098 | -- | -- |
| 149.16 | 0.57 | 9.17 | -- | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.17 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 10 | 84.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 57 | 87.04 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 71 | 87.11 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 73 | 87.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 79 | 87.85 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 80 | 87.90 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 84 | 88.10 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 87 | 88.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 91 | 88.38 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 126 | 88.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 144 | 88.87 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 145 | 88.89 | wind | 5 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 151 | 89.00 | wind | 3 | 270 | < th | dose independent | rect. | 24 | 7 |
| 183 | 89.34 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 201 | 89.55 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 216 | 89.58 | humidity | 60 | 720 | < th | dose independent | rect. | 18 | 1 |
| 234 | 89.67 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 384 | 90.37 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 387 | 90.38 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 390 | 90.40 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 394 | 90.46 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 401 | 90.55 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 429 | 90.64 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 560 | 91.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 589 | 91.37 | wind | 3 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 652 | 91.62 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |
| 746 | 91.93 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 4 |
| 747 | 91.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 751 | 91.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 756 | 92.01 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 779 | 92.06 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 855 | 92.21 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 934 | 92.38 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 935 | 92.38 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |