Os02g0827900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Signal peptidase 18 subunit (Fragment).
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Os02g0827900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Signal peptidase 18 subunit (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.79 | 0.49 | 9.63 | 0.772 | 1.26 | -1.34 | 0.179 | 0.317 | -0.0163 | 23.5 | 81 | 1241 | -- | -- |
| 108.91 | 0.486 | 9.63 | 0.743 | 1.26 | -1.32 | 0.216 | -- | -0.0195 | 23.5 | 81.24 | 1240 | -- | -- |
| 108.92 | 0.486 | 9.63 | 0.77 | 1.26 | -1.35 | -- | 0.382 | -0.0183 | 23.5 | 81 | 1240 | -- | -- |
| 109.11 | 0.486 | 9.63 | 0.735 | 1.26 | -1.32 | -- | -- | -0.0193 | 23.5 | 81.33 | 1240 | -- | -- |
| 179.22 | 0.624 | 9.6 | 0.691 | -- | -1.2 | -- | 0.284 | -0.00421 | -- | 84.27 | 1565 | -- | -- |
| 147.59 | 0.57 | 9.62 | 0.522 | 1.06 | -- | 0.0055 | -- | 0.0213 | 23.1 | -- | -- | -- | -- |
| 147.59 | 0.569 | 9.62 | 0.521 | 1.06 | -- | -- | -- | 0.0213 | 23.1 | -- | -- | -- | -- |
| 179.46 | 0.624 | 9.6 | 0.705 | -- | -1.17 | -- | -- | -0.00533 | -- | 84.03 | 1569 | -- | -- |
| 122.31 | 0.515 | 9.64 | -- | 1.28 | -1.23 | -- | -- | -0.0401 | 23.4 | 85.93 | 1220 | -- | -- |
| 217.11 | 0.689 | 9.59 | 0.546 | -- | -- | -- | -- | 0.0302 | -- | -- | -- | -- | -- |
| 154.76 | 0.582 | 9.63 | -- | 1.06 | -- | -- | -- | -0.0368 | 23.2 | -- | -- | -- | -- |
| 189.94 | 0.644 | 9.61 | -- | -- | -1.15 | -- | -- | -0.0218 | -- | 112.6 | 1572 | -- | -- |
| 224.99 | 0.7 | 9.61 | -- | -- | -- | -- | -- | -0.0304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.98 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 4 | 110.97 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 6 | 111.39 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 111.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 64 | 111.61 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 72 | 111.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 75 | 111.64 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 77 | 111.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 78 | 111.67 | humidity | 80 | 1440 | < th | dose dependent | sin | 22 | NA |
| 89 | 111.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 90 | 111.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 110 | 111.78 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 16 |
| 126 | 111.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 189 | 112.31 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 6 |
| 193 | 112.36 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 8 |
| 202 | 112.42 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 205 | 112.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 211 | 112.50 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 13 |
| 224 | 112.60 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 11 |
| 234 | 112.67 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 17 |
| 244 | 112.77 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 245 | 112.77 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 249 | 112.78 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 273 | 112.89 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 277 | 112.90 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 5 |
| 354 | 113.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 361 | 113.17 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 370 | 113.18 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 377 | 113.22 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 398 | 113.29 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 422 | 113.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 442 | 113.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 448 | 113.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 476 | 113.55 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 525 | 113.79 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 540 | 113.82 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 566 | 113.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 603 | 113.97 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 639 | 114.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 669 | 114.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 676 | 114.12 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 678 | 114.12 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 700 | 114.12 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 734 | 114.14 | humidity | 70 | 1440 | < th | dose independent | sin | 17 | NA |
| 790 | 114.20 | humidity | 50 | 720 | > th | dose dependent | sin | 16 | NA |
| 811 | 114.28 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 865 | 114.42 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 880 | 114.47 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 881 | 114.47 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 969 | 114.50 | humidity | 70 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 975 | 114.52 | humidity | 70 | 1440 | > th | dose independent | sin | 20 | NA |