Os02g0824700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit).
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Os02g0824700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.21 | 0.2 | 11.1 | -0.652 | 0.106 | 0.911 | 0.0519 | -1.36 | -0.0895 | 0.15 | 13.18 | 1231 | -- | -- |
| 19.73 | 0.207 | 11.1 | -0.364 | 0.106 | 0.899 | -0.0557 | -- | -0.013 | 23.6 | 12.84 | 1241 | -- | -- |
| 18.22 | 0.199 | 11.1 | -0.649 | 0.106 | 0.911 | -- | -1.33 | -0.0885 | 0.168 | 13.29 | 1231 | -- | -- |
| 19.73 | 0.207 | 11.1 | -0.362 | 0.0969 | 0.899 | -- | -- | -0.012 | 0.198 | 13.44 | 1212 | -- | -- |
| 18.49 | 0.2 | 11.1 | -0.638 | -- | 0.976 | -- | -1.32 | -0.0869 | -- | 12.49 | 1073 | -- | -- |
| 32.78 | 0.268 | 11 | -0.0926 | 0.199 | -- | -0.0318 | -- | 0.146 | 0.794 | -- | -- | -- | -- |
| 32.79 | 0.268 | 11 | -0.0914 | 0.199 | -- | -- | -- | 0.147 | 0.779 | -- | -- | -- | -- |
| 19.98 | 0.208 | 11.1 | -0.366 | -- | 0.96 | -- | -- | -0.0144 | -- | 12.36 | 1069 | -- | -- |
| 22.7 | 0.222 | 11 | -- | 0.0837 | 0.768 | -- | -- | 0.0527 | 1.36 | 13.65 | 1091 | -- | -- |
| 35.27 | 0.278 | 11 | -0.0841 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 33.01 | 0.269 | 11 | -- | 0.198 | -- | -- | -- | 0.157 | 0.758 | -- | -- | -- | -- |
| 23.07 | 0.224 | 11.1 | -- | -- | 0.812 | -- | -- | 0.0481 | -- | 13.3 | 1048 | -- | -- |
| 35.46 | 0.278 | 11 | -- | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 2 | 17.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 4 | 17.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 7 | 17.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 14 | 17.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 20 | 17.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 19 |
| 24 | 17.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 36 | 17.96 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 37 | 17.96 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 39 | 17.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 43 | 17.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 74 | 17.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 107 | 18.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 284 | 18.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 310 | 18.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 412 | 18.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 416 | 18.34 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 476 | 18.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 479 | 18.37 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 499 | 18.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |