Os02g0823300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Neuralized protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0823300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Neuralized protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.07 | 0.301 | 11.3 | 0.101 | 0.94 | -0.593 | 0.139 | 2.04 | -0.15 | 4.72 | 10.1 | 84 | -- | -- |
| 43.86 | 0.311 | 11.4 | -0.195 | 0.945 | -0.561 | -0.334 | -- | -0.232 | 4.74 | 10.1 | 84 | -- | -- |
| 41.11 | 0.299 | 11.3 | 0.0862 | 0.938 | -0.596 | -- | 1.94 | -0.154 | 4.71 | 10.5 | 83 | -- | -- |
| 44.06 | 0.309 | 11.4 | -0.186 | 0.923 | -0.565 | -- | -- | -0.23 | 4.66 | 8.127 | 111 | -- | -- |
| 72.48 | 0.397 | 11.3 | 0.293 | -- | -1.37 | -- | 1.71 | -0.0258 | -- | 18.16 | 172 | -- | -- |
| 46.92 | 0.321 | 11.4 | -0.305 | 1.08 | -- | -0.322 | -- | -0.31 | 4.42 | -- | -- | -- | -- |
| 47.18 | 0.322 | 11.4 | -0.302 | 1.07 | -- | -- | -- | -0.309 | 4.47 | -- | -- | -- | -- |
| 75.69 | 0.405 | 11.4 | 0.0217 | -- | -1.28 | -- | -- | -0.0796 | -- | 17.9 | 194 | -- | -- |
| 44.87 | 0.312 | 11.4 | -- | 0.894 | -0.657 | -- | -- | -0.199 | 4.7 | 10.85 | 116 | -- | -- |
| 108.96 | 0.488 | 11.4 | -0.26 | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
| 49.58 | 0.329 | 11.4 | -- | 1.07 | -- | -- | -- | -0.275 | 4.48 | -- | -- | -- | -- |
| 75.7 | 0.405 | 11.4 | -- | -- | -1.27 | -- | -- | -0.087 | -- | 17.9 | 194 | -- | -- |
| 110.74 | 0.491 | 11.4 | -- | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 16 |
| 17 | 37.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 34 | 37.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 7 |
| 35 | 37.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 9 |
| 41 | 37.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 65 | 37.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 82 | 37.99 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 98 | 38.07 | temperature | 30 | 90 | < th | dose dependent | sin | 17 | NA |
| 107 | 38.13 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 17 |
| 163 | 38.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 227 | 38.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 10 |
| 242 | 38.78 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 259 | 38.84 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 261 | 38.85 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 19 |
| 270 | 38.88 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 16 |
| 337 | 39.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 12 |
| 395 | 39.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 398 | 39.27 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 16 |
| 448 | 39.38 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 5 |
| 548 | 39.56 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 13 |
| 567 | 39.59 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 15 |
| 579 | 39.61 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 612 | 39.66 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 16 |
| 625 | 39.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 653 | 39.71 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 16 | 17 |
| 654 | 39.72 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 6 |
| 694 | 39.78 | temperature | 20 | 90 | < th | dose independent | sin | 14 | NA |
| 695 | 39.78 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 755 | 39.85 | temperature | 20 | 10 | < th | dose independent | sin | 14 | NA |
| 828 | 39.94 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 17 |
| 844 | 39.96 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 19 |
| 854 | 39.97 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 16 |
| 865 | 39.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 892 | 40.01 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 18 |
| 908 | 40.03 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |
| 933 | 40.07 | wind | 1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 960 | 40.10 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 981 | 40.13 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 21 | 1 |
| 995 | 40.15 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 11 |