BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0823300 Os02g0823300|AK069544
(754 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864 338 7e-93
AT2G27950.1 | chr2:11899422-11903171 REVERSE LENGTH=840 220 3e-57
AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731 95 1e-19
AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653 95 1e-19
AT4G20160.1 | chr4:10890983-10894971 FORWARD LENGTH=1189 57 5e-08
AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463 55 1e-07
AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379 54 4e-07
AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360 53 6e-07
AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400 52 2e-06
AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377 50 4e-06
AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405 50 4e-06
AT1G59560.1 | chr1:21881741-21883632 FORWARD LENGTH=339 49 9e-06
>AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864
Length = 863
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 246/674 (36%), Positives = 320/674 (47%), Gaps = 92/674 (13%)
Query: 143 WRELEHRRSDADQPFDREPSPDTAD--RERVRQIARRLXXXXXXXXXXXXXXXXG----E 196
W + D + RE SPD D RERVR IAR E
Sbjct: 220 WSHDRNEHGDNNNTSSREQSPDLGDGERERVRHIARGWMDSRINDHSSNVRQRDDNRRPE 279
Query: 197 WLGETERQRVRLVREWVQMASQPRDSRVASRRDDTAAXXXXXXXXXXX------------ 244
WLG+TER+RVR++REW+QM SQ R A+ R+D +
Sbjct: 280 WLGDTERERVRIIREWMQMTSQQRGGARATPREDQRSTSEADRNHDAAPQVDRVRVGLAV 339
Query: 245 ----------------XXXXQARLDVITRMARERQRELQGISGYHIVSEFPHRSRNRIQG 288
QA LD++ R RERQRELQG+ + VS+F HR NRIQ
Sbjct: 340 NHEEGQPPHVRRDLRRVRGRQALLDLLMRAERERQRELQGLLEHRAVSDFAHR--NRIQS 397
Query: 289 LLRGRFLRNV--VLPXXXXXXXXXXXXXXLGQLRQSHRVSTLRSESAVSSEDVSRFDSSV 346
LLRGRFLRN +P L QLR+ VS LR E++ V
Sbjct: 398 LLRGRFLRNERPTVPERTPSMASRE----LLQLRERQTVSGLREGFHNGRENI------V 447
Query: 347 AESVGVLGSDEPQQGAEVRALTGTENTTQIMLEDVGLQEADAENAAIESPSVALDNMVEM 406
E+ +D A+ T +Q + ++ ++ I P + N+
Sbjct: 448 HENTSNTDNDNSNTSTNALAIAITAGNSQRVTDESSTSSRQGNDSPI-LPDNSESNLANA 506
Query: 407 HETQVDNRLQDEAGRDARFWQ--------PSLDDS-LDRWPNETAEDAERNWEDNAEELH 457
+R +E R WQ P+L+ + L ++ D R+ E + ++H
Sbjct: 507 ------DRDWEEDTNQRRIWQENVPVDERPNLEQTTLTQFDGYDNTDINRD-ETSVSDMH 559
Query: 458 SET--MEDDARXXXXXXXXXXXXXXXXXXGTENWQDDFQDSPLDMGPIP-RTENRFIPPD 514
E DD G NW ++ + R NRF PP+
Sbjct: 560 REASGFADDEYRTQEAHGVWHENSSRQSDG--NWPGTRSEALRSRRVVQLRRLNRFHPPE 617
Query: 515 DDNVYXXXXXXXXXXXXXXXXXXXGFGESLERLIRSYVQRRGRGPLNW----NLDAAIPS 570
DDNVY GF ESL++LI+SY +RRG ++W NL AIP
Sbjct: 618 DDNVYSMELRELLSRRSVSNLLHSGFRESLDQLIQSYAERRGHTHVDWDLHANLQTAIP- 676
Query: 571 VNSPNENQEQERNAETRQF-----QAXXXXXXXXXXXXXXXXXXXXWHRELRHNNWS--T 623
+SP ER+ + + F Q WH++L H +WS +
Sbjct: 677 -DSP------ERDTDHQVFVRNDNQLNGINGSQLLPTPPAPPPQPIWHQDLHHTSWSRHS 729
Query: 624 RHR---EWDAINDLKADMGRLQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAGP 680
HR EW+ +NDL+ D+ RLQQGMS +QRMLEACMDMQLELQRSVRQEVSAALNR AG
Sbjct: 730 MHRSEIEWEVMNDLRGDVARLQQGMSQMQRMLEACMDMQLELQRSVRQEVSAALNRSAGD 789
Query: 681 EGYPTDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLC 740
+G + S+DGS+W V KGTCCVCCD ID+LLYRCGHMCTCSKCANEL+R+GGKCPLC
Sbjct: 790 QGMSAETSEDGSRWSHVSKGTCCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKCPLC 849
Query: 741 RAPIAEVVRAYSVM 754
RAPI EV+RAYS++
Sbjct: 850 RAPIIEVIRAYSIL 863
>AT2G27950.1 | chr2:11899422-11903171 REVERSE LENGTH=840
Length = 839
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 148/251 (58%), Gaps = 6/251 (2%)
Query: 510 FIPPDDDNVYXXXXXXXXXXXXXXXXXXXGFGESLERLIRSYVQRRGRGPLNWNLDAAIP 569
F PPDD N GF E+L +LI+SY+ RR + P++W
Sbjct: 589 FFPPDDGNENNMELRELSSRRRVSNLLQSGFRENLSQLIQSYMDRRSQNPVDWEEAETYS 648
Query: 570 SVNSPNENQEQERNAETRQFQAXXXXXXXXXXXXXXXXXXXXWHRELRHNNWSTR--HR- 626
E+ EQ+ +A++ + W + H+NW H+
Sbjct: 649 DHTIVGEDTEQQDDAQSGGQELDAVESPPLTLPSPVIPIQPRWDHDRSHSNWPAHDLHQG 708
Query: 627 ---EWDAINDLKADMGRLQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAGPEGY 683
+WD+INDL+ DMGR+QQ M ++QRMLEACM+MQLELQRS+RQEVSAA++R G
Sbjct: 709 IGMDWDSINDLRVDMGRIQQRMDNLQRMLEACMEMQLELQRSIRQEVSAAMHRSTDQPGP 768
Query: 684 PTDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAP 743
D + SKW+ VRKG CCVCC++ IDSLLYRCGHM TC KCA +L+ +GGKCP+C+AP
Sbjct: 769 SKDTASYESKWEYVRKGICCVCCESNIDSLLYRCGHMNTCEKCAKKLVEAGGKCPMCQAP 828
Query: 744 IAEVVRAYSVM 754
+ EVVRAYS++
Sbjct: 829 VIEVVRAYSIL 839
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 148 HRRSDADQPFDREPSPD--TADRERVRQIARRLXXX----XXXXXXXXXXXXXGEWLGET 201
H S+ PF E D +RERVRQI R EWLGET
Sbjct: 113 HNSSEDLGPFQSEHFSDLGMGERERVRQIFREWTSSGTGQHTDSASQATNSSRAEWLGET 172
Query: 202 ERQRVRLVREWVQMASQPRDSRVASRRDD-------------------TAAXXXXXXXXX 242
E++RVR++RE VQM SQ R + R + +
Sbjct: 173 EQERVRIIREMVQMNSQQRPALGDLREEQPIEGANQIERVLDGIVVNPNSIQNEHARRGI 232
Query: 243 XXXXXXQARLDVITRMARERQRELQGISGYHIVSEFPHRSRNRIQGLLRGRFLRNVVLPX 302
Q +D++ ERQREL+G+ +H VS F H RNRIQ LLRGRFLRN
Sbjct: 233 RKLCGRQVWVDMLKMAEMERQRELEGLMQHHAVSNFAH--RNRIQALLRGRFLRNG--DN 288
Query: 303 XXXXXXXXXXXXXLGQLRQSHRVSTLRSESAVSSEDVSRFDSSVA 347
LG LR+ H VS LR E +SR D S +
Sbjct: 289 DDKEKPTSSAATELGFLRERHTVSELREEF------ISRLDRSAS 327
>AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731
Length = 730
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 26/124 (20%)
Query: 627 EWDAINDLKADMGRLQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAGPEGYPTD 686
E + I+ +++ + +LQQ MS ++ ++ C+D LQ QE P
Sbjct: 627 EMELISGMRSQIQQLQQEMSVLRDSVKTCLDANASLQHKAHQE---------NP------ 671
Query: 687 LSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAE 746
K CCVC + Q++++LYRCGHMC C KCANEL SGGKCP+CRA I +
Sbjct: 672 -----------MKRKCCVCDETQVEAVLYRCGHMCMCLKCANELHWSGGKCPICRAQIVD 720
Query: 747 VVRA 750
VVR
Sbjct: 721 VVRV 724
>AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653
Length = 652
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 26/111 (23%)
Query: 641 LQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAGPEGYPTDLSDDGSKWDQVRKG 700
LQ MS ++ ++ C+D+ LQ+SV E N F K
Sbjct: 563 LQLEMSELRDSVKTCLDVNASLQKSVHLE-----NPF---------------------KR 596
Query: 701 TCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEVVRAY 751
CCVC + Q+++LLYRCGHMCTC +CANEL +GGKCP+C A I +VVR +
Sbjct: 597 KCCVCNETQVETLLYRCGHMCTCLRCANELQYNGGKCPICHAKILDVVRVF 647
>AT4G20160.1 | chr4:10890983-10894971 FORWARD LENGTH=1189
Length = 1188
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 620 NWSTRHREWDAINDLKADMGRLQQGMSSIQRMLEACMDMQLELQRSVRQEVSAALNRFAG 679
N ST+ + I+DLK M +LQ+ M ++ +++C+DMQL Q+SV Q++S +
Sbjct: 1089 NQSTQ--DMQTISDLKEQMEQLQREMLELRNTVKSCIDMQLHFQKSVTQDLSRS------ 1140
Query: 680 PEGYPTDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMC 721
G + D K RK CCVC + +DSLLYR + C
Sbjct: 1141 --GSSAEQRVDPKKDPLKRK--CCVCSEMPVDSLLYR--YFC 1176
>AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463
Length = 462
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 688 SDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEV 747
S +G + + GTC +C DA +++ CGH+ C C E+ CP+CRA I +V
Sbjct: 397 STEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQV 456
Query: 748 VRAYSV 753
++ Y V
Sbjct: 457 IKLYRV 462
>AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379
Length = 378
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 685 TDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPI 744
+ L D G K C +C D+ + C H+C CS CA EL KCP+CR PI
Sbjct: 311 SGLEDTGGK-------ECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPI 363
Query: 745 AEVVR 749
E+V+
Sbjct: 364 HELVK 368
>AT3G06140.1 | chr3:1856993-1858777 REVERSE LENGTH=360
Length = 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 664 RSVRQEVSAALNRFAGPEGYPTDLSDDGSKWDQVRKGTCCVCCDAQI-DSLLYRCGHMCT 722
+ V+Q + R+ E Y + S D+ GT CV C + D+ + C H+C
Sbjct: 263 KVVKQILWIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCM 322
Query: 723 CSKCANELIRSGGKCPLCRAPIAEVV 748
CS CA EL KCP+CR PI E++
Sbjct: 323 CSDCAKELRLQSNKCPICRQPIEELL 348
>AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400
Length = 399
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 699 KGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEVVRAYS 752
K C +C DA D CGH +C +C ++ R+ G+CP+CR I V R Y+
Sbjct: 345 KSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYT 398
>AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 700 GTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEVVRAYSV 753
G C +C DA +++ CGH+ C C E+ CP+CRA I +V++ Y V
Sbjct: 323 GLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376
>AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405
Length = 404
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 699 KGTCCVCCDAQIDSLLYRCGHMCTCSKCANELIRSGGKCPLCRAPIAEVVRAYS 752
K C +C DA D CGH +C +C ++ R+ G+CP+CR + V R Y+
Sbjct: 350 KSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIYT 403
>AT1G59560.1 | chr1:21881741-21883632 FORWARD LENGTH=339
Length = 338
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 663 QRSVRQEVSAALNRFAGPEGYPTDLSDDGSKWDQVRKGTCCVCCDAQIDSLLYRCGHMCT 722
Q ++++ V AA R G T S DG D C VC D + ++ CGHMC
Sbjct: 259 QFALKRVVDAAARRAKPVTGGGT--SRDGDTPD-----LCVVCLDQKYNTAFVECGHMCC 311
Query: 723 CSKCANELIRSGGKCPLCRAPIAEVVRAY 751
C+ C+ +L CPLCR I +V++ Y
Sbjct: 312 CTPCSLQL----RTCPLCRERIQQVLKIY 336
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,367,193
Number of extensions: 410774
Number of successful extensions: 1476
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1477
Number of HSP's successfully gapped: 17
Length of query: 754
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 648
Effective length of database: 8,200,473
Effective search space: 5313906504
Effective search space used: 5313906504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)