Os02g0822200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein.
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Os02g0822200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.53 | 0.208 | 11.6 | 0.492 | 0.837 | -0.602 | 0.428 | 0.814 | 0.153 | 21.6 | 78.19 | 1423 | -- | -- |
| 20.07 | 0.209 | 11.6 | 0.461 | 0.852 | -0.549 | 0.376 | -- | 0.15 | 21.7 | 79 | 1384 | -- | -- |
| 20.16 | 0.209 | 11.6 | 0.474 | 0.842 | -0.589 | -- | 0.767 | 0.153 | 21.7 | 78.04 | 1382 | -- | -- |
| 20.64 | 0.212 | 11.6 | 0.416 | 0.843 | -0.549 | -- | -- | 0.143 | 21.7 | 79 | 1383 | -- | -- |
| 58.33 | 0.358 | 11.6 | 0.419 | -- | -0.274 | -- | 0.0849 | 0.103 | -- | 78 | 1502 | -- | -- |
| 23.66 | 0.228 | 11.7 | 0.401 | 0.85 | -- | 0.391 | -- | 0.115 | 21.6 | -- | -- | -- | -- |
| 24.23 | 0.23 | 11.7 | 0.386 | 0.847 | -- | -- | -- | 0.114 | 21.6 | -- | -- | -- | -- |
| 58.38 | 0.357 | 11.6 | 0.417 | -- | -0.274 | -- | -- | 0.102 | -- | 78 | 1502 | -- | -- |
| 25.09 | 0.233 | 11.7 | -- | 0.85 | -0.525 | -- | -- | 0.109 | 21.8 | 79.14 | 1378 | -- | -- |
| 66.71 | 0.382 | 11.6 | 0.393 | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
| 28.15 | 0.248 | 11.7 | -- | 0.848 | -- | -- | -- | 0.071 | 21.6 | -- | -- | -- | -- |
| 62.95 | 0.371 | 11.6 | -- | -- | -0.265 | -- | -- | 0.0562 | -- | 78 | 1502 | -- | -- |
| 70.77 | 0.393 | 11.6 | -- | -- | -- | -- | -- | 0.0686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.79 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 2 | 18.82 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 10 | 19.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 12 | 19.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 21 | 19.10 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 30 | 19.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 41 | 19.29 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 46 | 19.31 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 51 | 19.34 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 62 | 19.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 66 | 19.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 71 | 19.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 18 |
| 73 | 19.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 85 | 19.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 88 | 19.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 91 | 19.43 | humidity | 90.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 102 | 19.45 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 19 |
| 108 | 19.46 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 110 | 19.46 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 129 | 19.48 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 150 | 19.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 179 | 19.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 185 | 19.54 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 188 | 19.54 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 195 | 19.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 206 | 19.55 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 213 | 19.56 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 257 | 19.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 373 | 19.62 | radiation | 1.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 396 | 19.62 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 397 | 19.63 | radiation | 1.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 415 | 19.65 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 466 | 19.70 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 23 | NA |
| 471 | 19.71 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 5 |
| 528 | 19.74 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 531 | 19.75 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 535 | 19.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 538 | 19.75 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 558 | 19.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 564 | 19.77 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 569 | 19.77 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 573 | 19.77 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 650 | 19.81 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 678 | 19.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 680 | 19.82 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 686 | 19.82 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 688 | 19.82 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 716 | 19.84 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 718 | 19.84 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 753 | 19.86 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 876 | 19.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 881 | 19.89 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 894 | 19.89 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 906 | 19.90 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 927 | 19.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 928 | 19.92 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 939 | 19.92 | humidity | 70.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 981 | 19.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 985 | 19.94 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 17 | NA |