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Os02g0822000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0151) R2 : 0.569
β1 : 1.2 (0.0552) R2dD : 0.466 R2D : 0.276
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.491 (0.0322) R2dN8 : 0.294 R2N8 : 0.104
σ : 0.283
deviance : 36.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.31 0.236 11.8 1.53 0.413 -0.482 -0.129 0.918 0.647 22.5 26.5 679 -- --
26.17 0.238 11.8 1.35 0.391 -0.438 0.0293 -- 0.616 22.5 26.4 654 -- --
25.36 0.235 11.8 1.53 0.414 -0.485 -- 0.876 0.646 22.6 26.5 691 -- --
26.12 0.238 11.8 1.32 0.399 -0.426 -- -- 0.593 22.6 26.4 654 -- --
32.36 0.266 11.8 1.27 -- -0.214 -- 0.0431 0.554 -- 26.5 691 -- --
31.71 0.264 11.9 1.19 0.281 -- -0.0924 -- 0.485 0.952 -- -- -- --
31.75 0.264 11.9 1.19 0.282 -- -- -- 0.485 0.935 -- -- -- --
31.07 0.26 11.9 1.25 -- -0.248 -- -- 0.534 -- 25.8 123 -- --
68.84 0.389 11.9 -- 0.243 -0.0845 -- -- 0.381 0.566 25.7 407 -- --
36.69 0.283 11.9 1.2 -- -- -- -- 0.491 -- -- -- -- --
69.3 0.389 11.9 -- 0.301 -- -- -- 0.352 1.11 -- -- -- --
71.62 0.395 11.9 -- -- -0.179 -- -- 0.414 -- 25.7 407 -- --
74.93 0.404 11.9 -- -- -- -- -- 0.357 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.32 temperature 15.0 10 > th dose dependent rect. 9 21
25 25.55 humidity 60.0 10 > th dose dependent rect. 6 12
39 25.85 temperature 25.0 30 > th dose independent rect. 9 16
40 25.87 temperature 25.0 30 > th dose independent rect. 9 19
51 25.96 temperature 30.0 90 < th dose dependent rect. 12 21
54 25.98 temperature 30.0 10 < th dose dependent rect. 12 22
56 26.01 temperature 25.0 30 > th dose independent rect. 9 21
58 26.03 precipitation 0.1 43200 > th dose independent rect. 17 1
59 26.03 precipitation 0.1 43200 < th dose independent rect. 17 1
61 26.03 precipitation 0.1 43200 < th dose dependent rect. 17 1
62 26.03 humidity 70.0 10 > th dose dependent rect. 6 10
64 26.03 temperature 30.0 90 < th dose dependent rect. 12 23
77 26.13 precipitation 0.1 43200 > th dose dependent rect. 17 1
86 26.20 temperature 25.0 30 > th dose independent rect. 9 14
108 26.34 humidity 80.0 10 > th dose independent rect. 6 12
112 26.35 radiation 40.0 90 < th dose dependent rect. 5 10
116 26.38 temperature 15.0 10 > th dose dependent rect. 9 14
118 26.39 radiation 30.0 90 < th dose dependent rect. 5 12
140 26.51 humidity 80.0 90 > th dose independent rect. 5 13
150 26.53 wind 1.0 43200 > th dose independent rect. 8 2
160 26.57 temperature 25.0 270 < th dose independent rect. 11 21
166 26.59 humidity 80.0 10 > th dose independent rect. 6 10
167 26.59 radiation 30.0 10 < th dose dependent rect. 6 8
174 26.62 humidity 70.0 10 > th dose dependent rect. 6 8
201 26.73 temperature 25.0 720 > th dose independent rect. 17 2
210 26.75 temperature 25.0 10 < th dose independent rect. 12 12
227 26.79 radiation 1.0 43200 < th dose dependent rect. 23 1
236 26.84 temperature 25.0 720 > th dose independent rect. 7 17
244 26.85 radiation 20.0 30 < th dose independent rect. 6 8
256 26.88 humidity 80.0 43200 > th dose independent rect. 23 1
258 26.88 radiation 1.0 43200 < th dose dependent rect. 1 3
265 26.91 atmosphere 1000.0 43200 > th dose independent rect. 15 1
266 26.91 atmosphere 1000.0 43200 < th dose independent rect. 15 1
274 26.93 radiation 20.0 30 < th dose independent rect. 6 18
278 26.94 humidity 80.0 43200 > th dose independent rect. 22 10
279 26.94 humidity 80.0 43200 < th dose independent rect. 21 11
294 26.96 wind 9.0 43200 > th dose dependent rect. 20 1
307 26.98 radiation 1.0 43200 < th dose dependent rect. 21 7
318 27.01 temperature 25.0 10 > th dose independent sin 18 NA
336 27.02 temperature 25.0 90 < th dose independent rect. 5 20
338 27.03 humidity 80.0 43200 < th dose independent rect. 22 2
347 27.04 wind 9.0 43200 < th dose independent rect. 20 1
352 27.04 humidity 80.0 43200 < th dose independent rect. 3 5
355 27.04 temperature 25.0 720 < th dose independent rect. 8 16
362 27.05 wind 9.0 43200 > th dose independent rect. 20 1
366 27.05 wind 1.0 43200 < th dose dependent rect. 8 2
367 27.05 atmosphere 1000.0 43200 < th dose dependent rect. 22 11
371 27.05 temperature 30.0 30 < th dose dependent rect. 23 23
378 27.06 atmosphere 1000.0 43200 < th dose dependent rect. 23 9
386 27.06 temperature 30.0 30 < th dose dependent rect. 5 23
389 27.07 wind 1.0 43200 < th dose independent rect. 8 2
399 27.07 temperature 25.0 720 < th dose independent rect. 5 19
401 27.07 atmosphere 1000.0 43200 < th dose dependent sin 9 NA
404 27.07 atmosphere 1000.0 43200 < th dose dependent rect. 2 6
411 27.07 temperature 25.0 720 > th dose dependent rect. 15 21
418 27.08 atmosphere 1000.0 43200 > th dose independent rect. 15 6
433 27.08 atmosphere 1000.0 43200 < th dose dependent rect. 14 15
438 27.08 radiation 40.0 10 < th dose dependent rect. 6 18
453 27.09 atmosphere 1000.0 43200 < th dose dependent rect. 23 1
455 27.09 atmosphere 1000.0 43200 < th dose dependent rect. 4 3
461 27.09 radiation 1.0 43200 < th dose dependent rect. 19 9
482 27.10 atmosphere 1000.0 43200 > th dose independent rect. 19 2
484 27.10 atmosphere 1000.0 43200 < th dose independent rect. 15 6
489 27.10 atmosphere 1000.0 43200 > th dose independent rect. 12 9
539 27.11 atmosphere 1000.0 43200 < th dose independent rect. 12 9
544 27.11 atmosphere 1000.0 43200 > th dose independent rect. 14 12
546 27.11 atmosphere 1000.0 43200 > th dose independent rect. 14 14
547 27.11 atmosphere 1000.0 43200 > th dose independent rect. 12 15
580 27.12 atmosphere 1000.0 43200 > th dose independent sin 17 NA
612 27.12 atmosphere 1000.0 43200 < th dose independent rect. 15 13
615 27.12 atmosphere 1000.0 43200 < th dose independent rect. 12 14
626 27.12 atmosphere 1000.0 43200 < th dose dependent rect. 5 1
659 27.13 atmosphere 1000.0 43200 < th dose independent sin 17 NA
662 27.13 atmosphere 1000.0 43200 < th dose independent rect. 19 1
717 27.13 temperature 25.0 720 > th dose dependent rect. 17 2
797 27.15 temperature 25.0 10 < th dose independent sin 18 NA
801 27.15 wind 9.0 1440 < th dose independent rect. 6 4
872 27.15 temperature 25.0 720 > th dose dependent rect. 16 18
932 27.16 temperature 30.0 30 < th dose dependent rect. 5 19
944 27.17 humidity 80.0 43200 > th dose independent rect. 5 1
945 27.17 humidity 80.0 43200 < th dose independent rect. 5 1
946 27.17 atmosphere 1000.0 43200 > th dose independent rect. 1 1
947 27.17 atmosphere 1000.0 43200 < th dose independent rect. 1 1
948 27.17 atmosphere 1000.0 43200 < th dose independent rect. 3 1
989 27.17 atmosphere 1000.0 43200 > th dose independent rect. 24 21