Os02g0818700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0818700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.64 | 0.268 | 10.4 | 0.175 | 0.645 | -0.243 | -0.248 | 1.06 | 0.145 | 20.9 | 5.101 | 15685 | -- | -- |
| 34 | 0.272 | 10.4 | -0.158 | 0.62 | -0.461 | -0.473 | -- | 0.0693 | 20.5 | 52.48 | 16419 | -- | -- |
| 32.73 | 0.266 | 10.4 | 0.173 | 0.638 | -0.249 | -- | 1.04 | 0.145 | 20.9 | 6.165 | 16212 | -- | -- |
| 33.39 | 0.269 | 10.4 | -0.278 | 0.617 | -0.481 | -- | -- | 0.00649 | 20.8 | 54.95 | 18672 | -- | -- |
| 50.8 | 0.334 | 10.4 | 0.0873 | -- | -0.536 | -- | 0.345 | 0.0345 | -- | 3.969 | 16027 | -- | -- |
| 36.96 | 0.285 | 10.4 | 0.0943 | 0.635 | -- | -0.214 | -- | 0.0487 | 20.9 | -- | -- | -- | -- |
| 37.11 | 0.285 | 10.4 | 0.101 | 0.635 | -- | -- | -- | 0.0486 | 20.9 | -- | -- | -- | -- |
| 51.07 | 0.334 | 10.4 | 0.0994 | -- | -0.539 | -- | -- | 0.0361 | -- | 3.969 | 16027 | -- | -- |
| 34.05 | 0.272 | 10.4 | -- | 0.636 | -0.388 | -- | -- | 0.013 | 20.9 | 53.27 | 16420 | -- | -- |
| 60.17 | 0.362 | 10.4 | 0.102 | -- | -- | -- | -- | 0.0443 | -- | -- | -- | -- | -- |
| 37.38 | 0.286 | 10.4 | -- | 0.635 | -- | -- | -- | 0.0373 | 21 | -- | -- | -- | -- |
| 51.33 | 0.335 | 10.4 | -- | -- | -0.539 | -- | -- | 0.025 | -- | 3.969 | 16027 | -- | -- |
| 60.44 | 0.363 | 10.4 | -- | -- | -- | -- | -- | 0.0331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.55 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 5 | 31.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 6 | 31.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 7 | 31.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 8 | 32.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 9 | 32.00 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 10 | 32.05 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 15 | 32.07 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 16 | 32.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 17 | 32.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 19 | 32.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 21 | 32.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 26 | 32.15 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 37 | 32.17 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 48 | 32.29 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 53 | 32.32 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 68 | 32.34 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 76 | 32.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 77 | 32.36 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 90 | 32.36 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 95 | 32.38 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 98 | 32.39 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 105 | 32.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 147 | 32.44 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 187 | 32.47 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 190 | 32.48 | radiation | 20.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 204 | 32.48 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 208 | 32.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 213 | 32.49 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 231 | 32.50 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 266 | 32.51 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 272 | 32.52 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 329 | 32.54 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 386 | 32.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 452 | 32.59 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 482 | 32.60 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 484 | 32.61 | radiation | 10.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 486 | 32.61 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 487 | 32.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 493 | 32.61 | radiation | 30.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 502 | 32.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 562 | 32.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 568 | 32.63 | radiation | 30.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 629 | 32.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 664 | 32.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 673 | 32.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 687 | 32.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 688 | 32.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 709 | 32.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 13 |
| 712 | 32.67 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 752 | 32.67 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 817 | 32.69 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 818 | 32.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 843 | 32.70 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 902 | 32.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 976 | 32.73 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 16 |