Os02g0817200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD-40 repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0817200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD-40 repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.16 | 0.226 | 9.93 | -0.0881 | 0.571 | -0.501 | 0.0909 | -0.0793 | 0.285 | 6.56 | 4.371 | 106 | -- | -- |
| 23.17 | 0.224 | 9.93 | -0.0898 | 0.569 | -0.497 | 0.0882 | -- | 0.285 | 6.56 | 3.93 | 110 | -- | -- |
| 23.17 | 0.224 | 9.93 | -0.0867 | 0.569 | -0.494 | -- | -0.0725 | 0.285 | 6.52 | 4.372 | 110 | -- | -- |
| 23.18 | 0.224 | 9.93 | -0.0885 | 0.569 | -0.492 | -- | -- | 0.284 | 6.52 | 4.129 | 110 | -- | -- |
| 28.69 | 0.249 | 9.93 | -0.0357 | -- | -0.772 | -- | 0.147 | 0.338 | -- | -15.52 | 508 | -- | -- |
| 26.46 | 0.241 | 9.94 | -0.0918 | 0.654 | -- | -0.058 | -- | 0.259 | 4.94 | -- | -- | -- | -- |
| 26.47 | 0.241 | 9.94 | -0.0916 | 0.654 | -- | -- | -- | 0.259 | 4.94 | -- | -- | -- | -- |
| 28.72 | 0.25 | 9.93 | -0.0408 | -- | -0.77 | -- | -- | 0.336 | -- | -17.39 | 500 | -- | -- |
| 23.31 | 0.225 | 9.93 | -- | 0.543 | -0.5 | -- | -- | 0.293 | 6.62 | 3.001 | 142 | -- | -- |
| 48.97 | 0.327 | 9.95 | -0.0677 | -- | -- | -- | -- | 0.276 | -- | -- | -- | -- | -- |
| 26.69 | 0.242 | 9.94 | -- | 0.652 | -- | -- | -- | 0.269 | 4.95 | -- | -- | -- | -- |
| 28.76 | 0.25 | 9.93 | -- | -- | -0.77 | -- | -- | 0.341 | -- | -3.166 | 517 | -- | -- |
| 49.09 | 0.327 | 9.94 | -- | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.66 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 4 | 20.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 6 | 20.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 8 | 21.01 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 11 | 21.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 12 | 21.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 14 | 21.15 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 15 | 21.17 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 21 | 21.20 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 23 | 21.24 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 24 | 21.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 42 | 21.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 44 | 21.40 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 51 | 21.46 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 53 | 21.48 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 54 | 21.48 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 57 | 21.50 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 59 | 21.51 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 60 | 21.51 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 75 | 21.60 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 92 | 21.67 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 97 | 21.68 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 11 |
| 99 | 21.68 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 106 | 21.69 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 107 | 21.69 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 119 | 21.73 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 120 | 21.73 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 128 | 21.74 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 132 | 21.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 136 | 21.76 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 10 |
| 138 | 21.77 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 139 | 21.77 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 154 | 21.81 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 163 | 21.82 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 167 | 21.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 169 | 21.84 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 178 | 21.85 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 186 | 21.87 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 201 | 21.89 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 202 | 21.89 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 217 | 21.92 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 218 | 21.92 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 234 | 21.94 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 240 | 21.95 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 242 | 21.95 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 244 | 21.96 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 246 | 21.96 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 252 | 21.97 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 253 | 21.97 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 265 | 21.99 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 274 | 22.00 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 279 | 22.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 284 | 22.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 287 | 22.01 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 292 | 22.02 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 294 | 22.02 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 295 | 22.02 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 298 | 22.02 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 301 | 22.02 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 302 | 22.02 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 310 | 22.03 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 338 | 22.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 351 | 22.07 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 368 | 22.09 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 369 | 22.10 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 372 | 22.10 | radiation | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 394 | 22.13 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 433 | 22.17 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 434 | 22.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 22 |
| 439 | 22.17 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 482 | 22.21 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 483 | 22.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 516 | 22.25 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 528 | 22.26 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 11 |
| 529 | 22.26 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 577 | 22.30 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 613 | 22.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 619 | 22.34 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 625 | 22.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 632 | 22.35 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 646 | 22.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 652 | 22.37 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 675 | 22.38 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 696 | 22.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 697 | 22.39 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 698 | 22.39 | radiation | 1.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 714 | 22.40 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 742 | 22.42 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 765 | 22.44 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 784 | 22.45 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 807 | 22.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 828 | 22.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 829 | 22.49 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 12 |
| 866 | 22.51 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 909 | 22.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 915 | 22.53 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 916 | 22.54 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 937 | 22.56 | radiation | 20.0 | 270 | < th | dose independent | sin | 6 | NA |
| 940 | 22.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 952 | 22.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 955 | 22.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 959 | 22.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 970 | 22.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 975 | 22.57 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 990 | 22.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 998 | 22.59 | temperature | 25.0 | 270 | < th | dose independent | sin | 8 | NA |
| 999 | 22.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |