BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0817200 Os02g0817200|AK073919
         (375 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31300.1  | chr2:13346313-13349787 REVERSE LENGTH=379          558   e-159
AT2G30910.1  | chr2:13153447-13156869 FORWARD LENGTH=379          553   e-158

>AT2G31300.1 | chr2:13346313-13349787 REVERSE LENGTH=379
          Length = 378

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/372 (72%), Positives = 310/372 (83%), Gaps = 6/372 (1%)

Query: 1   MAAAAIHQFAECITCHAWSPDHSMIAFCPNNNEVHIYKFFT-DKWEKLHVLSKHDQIVSG 59
           MA   +H+FAE ITCHAWSPD SM+A CPNN EVHIYK  + D WE+LHVL KHDQIVSG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 60  IDWSRSSNKIVTVSHDRNSYVWTQEGHDWVPTLVILKLNRAALCVQWSPKENKFAVGSGA 119
           IDWS  SNKIVTVSHDRNSYVW+ EG +WVPTLVIL+LNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 120 KSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGKCRVLSTFIKGVD 179
           K+VCICYYEQ+NNWW+SK++RK+HESSVTSVAWHPNN+LLATTSTDGKCRV STFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 180 TRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKTLAYAGHNSMIYFIDDVETSPA 239
           T+ S A +  + KFGEQI QLDLS  WAFGV+WSPSG TLAY GH+SMIYF+DDV  SP 
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 240 AQNLALRDLPLRDILFLSERTVIGVGFDCNPMIFSADETGLWSFVRYLDERKVT-TSTSR 298
           AQ++A RDLPLRD+LF+SE+ VIGVG+D NPM+F+AD+TG+WSF+RY+ E+K   + +S 
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300

Query: 299 ASQLSEAFGKLYG-QSKQVASSDTVEPSKPRGGVHENCITCIVPLRKGNDSIVKRFSTSG 357
           +SQ SEAFGK YG QSK   ++D    S  RGGVH+N IT IVPL KG    V RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDA---SDSRGGVHDNSITSIVPLGKGGSPKVMRFSTSG 357

Query: 358 LDGKIVVWDAEN 369
           LDGKI +WD EN
Sbjct: 358 LDGKIAIWDLEN 369



>AT2G30910.1 | chr2:13153447-13156869 FORWARD LENGTH=379
          Length = 378

 Score =  553 bits (1424), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 265/372 (71%), Positives = 310/372 (83%), Gaps = 6/372 (1%)

Query: 1   MAAAAIHQFAECITCHAWSPDHSMIAFCPNNNEVHIYKFFT-DKWEKLHVLSKHDQIVSG 59
           MA   +H+FAE ITCHAWSPD SM+A CPNN EVHIYK  + D WE+LHVL KHDQIVSG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 60  IDWSRSSNKIVTVSHDRNSYVWTQEGHDWVPTLVILKLNRAALCVQWSPKENKFAVGSGA 119
           IDWS  SNKIVTVSHDRNSYVW+ EG +WVPTLVIL+LNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 120 KSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGKCRVLSTFIKGVD 179
           K+VCICYYEQ+NNWW+SK++RK+HESSVTSVAWHPNN+LLATTSTDGKCRV STFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 180 TRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKTLAYAGHNSMIYFIDDVETSPA 239
           T+ S A +  + KFGEQI QLDLS  WAFGV+WSPSG TLAY GH+SMIYF+DDV  SP 
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 240 AQNLALRDLPLRDILFLSERTVIGVGFDCNPMIFSADETGLWSFVRYLDERKVT-TSTSR 298
           AQ++A RDLPLRD+LF+SE+ VIGVG+D NPM+F++D+TG+WSF+RY+ E+K   +++S 
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 299 ASQLSEAFGKLYG-QSKQVASSDTVEPSKPRGGVHENCITCIVPLRKGNDSIVKRFSTSG 357
           +SQ SEAFGK YG QSK   ++D    S+ RGGVH+NCI  IV L K     V RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDA---SESRGGVHDNCINSIVSLSKAGSPKVMRFSTSG 357

Query: 358 LDGKIVVWDAEN 369
           LDGK+ +WD EN
Sbjct: 358 LDGKVAIWDLEN 369



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.131    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,693,897
Number of extensions: 359958
Number of successful extensions: 1245
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1237
Number of HSP's successfully gapped: 6
Length of query: 375
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 275
Effective length of database: 8,364,969
Effective search space: 2300366475
Effective search space used: 2300366475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)