Os02g0816800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os02g0816800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.77 | 0.265 | 9.23 | -0.0711 | 0.309 | 0.642 | 0.272 | 0.11 | -0.428 | 9.69 | 24.33 | 126 | -- | -- |
| 31.78 | 0.263 | 9.23 | -0.0545 | 0.303 | 0.628 | 0.253 | -- | -0.422 | 9.67 | 24.43 | 141 | -- | -- |
| 32 | 0.263 | 9.23 | -0.0527 | 0.298 | 0.637 | -- | 0.0515 | -0.431 | 9.33 | 23.96 | 178 | -- | -- |
| 32 | 0.263 | 9.23 | -0.0457 | 0.298 | 0.622 | -- | -- | -0.42 | 9.41 | 24.4 | 168 | -- | -- |
| 35.7 | 0.278 | 9.23 | -0.0627 | -- | 0.617 | -- | 0.151 | -0.403 | -- | 26.31 | 542 | -- | -- |
| 37.31 | 0.286 | 9.25 | -0.203 | 0.285 | -- | 0.166 | -- | -0.533 | 8.48 | -- | -- | -- | -- |
| 37.39 | 0.286 | 9.25 | -0.198 | 0.286 | -- | -- | -- | -0.533 | 8.3 | -- | -- | -- | -- |
| 35.73 | 0.278 | 9.23 | -0.0323 | -- | 0.611 | -- | -- | -0.395 | -- | 26.4 | 524 | -- | -- |
| 32.05 | 0.264 | 9.23 | -- | 0.295 | 0.633 | -- | -- | -0.418 | 9.44 | 24.4 | 179 | -- | -- |
| 41.93 | 0.303 | 9.26 | -0.197 | -- | -- | -- | -- | -0.53 | -- | -- | -- | -- | -- |
| 38.43 | 0.29 | 9.25 | -- | 0.285 | -- | -- | -- | -0.511 | 8.35 | -- | -- | -- | -- |
| 35.75 | 0.278 | 9.23 | -- | -- | 0.623 | -- | -- | -0.389 | -- | 26.4 | 526 | -- | -- |
| 42.95 | 0.306 | 9.25 | -- | -- | -- | -- | -- | -0.508 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.91 | humidity | 80 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 2 | 30.06 | humidity | 80 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 3 | 30.18 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 5 | 30.44 | temperature | 20 | 90 | > th | dose independent | rect. | 8 | 21 |
| 6 | 30.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 7 | 30.57 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 9 | 30.64 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 17 | 31.02 | temperature | 15 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 27 | 31.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 29 | 31.21 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 41 | 31.34 | humidity | 80 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 46 | 31.42 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 50 | 31.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 55 | 31.49 | wind | 5 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 56 | 31.49 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 58 | 31.50 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 69 | 31.59 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 70 | 31.59 | temperature | 25 | 270 | < th | dose dependent | sin | 9 | NA |
| 73 | 31.59 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 79 | 31.62 | radiation | 10 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 80 | 31.62 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 8 |
| 100 | 31.70 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 104 | 31.71 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 118 | 31.74 | humidity | 60 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 122 | 31.75 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 126 | 31.76 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 130 | 31.76 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 146 | 31.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 147 | 31.80 | radiation | 10 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 158 | 31.81 | wind | 5 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 170 | 31.81 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 171 | 31.82 | wind | 5 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 172 | 31.82 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 178 | 31.83 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 191 | 31.84 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 192 | 31.85 | wind | 5 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 211 | 31.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 228 | 31.89 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 237 | 31.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 257 | 31.91 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 277 | 31.92 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 279 | 31.93 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 280 | 31.93 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 281 | 31.93 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 284 | 31.93 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 292 | 31.94 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 313 | 31.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 330 | 31.97 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 341 | 31.98 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 351 | 31.98 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 355 | 31.99 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 360 | 31.99 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 372 | 32.00 | radiation | 10 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 383 | 32.01 | humidity | 60 | 43200 | < th | dose dependent | sin | 22 | NA |
| 418 | 32.02 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 12 |
| 486 | 32.05 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 488 | 32.06 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 514 | 32.07 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 516 | 32.07 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 580 | 32.08 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 601 | 32.08 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 694 | 32.10 | radiation | 40 | 43200 | > th | dose independent | sin | 15 | NA |
| 731 | 32.11 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 737 | 32.11 | humidity | 80 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 739 | 32.11 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 13 |
| 750 | 32.12 | temperature | 25 | 14400 | > th | dose dependent | sin | 1 | NA |
| 779 | 32.14 | radiation | 10 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 798 | 32.15 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 881 | 32.18 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 896 | 32.19 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 995 | 32.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 998 | 32.23 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 4 |