Os02g0816700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0816700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.97 | 0.407 | 8.55 | -1.56 | 2.41 | -1.88 | 0.491 | -0.169 | -0.532 | 5.81 | 28.22 | 10 | -- | -- |
| 74.56 | 0.402 | 8.56 | -1.58 | 2.36 | -1.85 | 0.387 | -- | -0.55 | 5.89 | 27 | 11 | -- | -- |
| 74.75 | 0.406 | 8.55 | -1.5 | 2.35 | -1.86 | -- | -0.377 | -0.532 | 5.87 | 26.88 | 11 | -- | -- |
| 74.94 | 0.403 | 8.56 | -1.57 | 2.36 | -1.85 | -- | -- | -0.552 | 5.88 | 27 | 11 | -- | -- |
| 322.39 | 0.841 | 8.55 | -1.33 | -- | -1.6 | -- | -0.635 | -0.33 | -- | 24.1 | 3 | -- | -- |
| 124.46 | 0.523 | 8.46 | -1.13 | 2.13 | -- | 0.355 | -- | -0.141 | 6.71 | -- | -- | -- | -- |
| 124.78 | 0.523 | 8.46 | -1.13 | 2.13 | -- | -- | -- | -0.142 | 6.7 | -- | -- | -- | -- |
| 323.08 | 0.841 | 8.56 | -1.42 | -- | -1.54 | -- | -- | -0.347 | -- | 24.1 | 3 | -- | -- |
| 133.07 | 0.54 | 8.49 | -- | 2.24 | -1.24 | -- | -- | -0.257 | 6.17 | 26.7 | 10 | -- | -- |
| 361.29 | 0.888 | 8.51 | -1.08 | -- | -- | -- | -- | -0.0996 | -- | -- | -- | -- | -- |
| 158.16 | 0.588 | 8.43 | -- | 2.11 | -- | -- | -- | -0.0166 | 6.73 | -- | -- | -- | -- |
| 372.07 | 0.901 | 8.51 | -- | -- | -1.07 | -- | -- | -0.125 | -- | 24.1 | 2 | -- | -- |
| 391.84 | 0.924 | 8.48 | -- | -- | -- | -- | -- | 0.0198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 14 | 74.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 16 | 74.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 42 | 75.74 | temperature | 10 | 720 | > th | dose dependent | sin | 17 | NA |
| 59 | 76.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 65 | 76.09 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 67 | 76.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 72 | 76.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 79 | 76.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 82 | 76.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 98 | 76.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 177 | 76.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 179 | 76.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 223 | 77.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 224 | 77.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 226 | 77.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 247 | 77.11 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 248 | 77.12 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 279 | 77.25 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 340 | 77.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 349 | 77.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 369 | 77.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 403 | 77.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 418 | 77.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 478 | 77.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 480 | 77.83 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 590 | 78.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 662 | 78.12 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 674 | 78.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 798 | 78.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 870 | 78.43 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 873 | 78.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 896 | 78.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 903 | 78.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 950 | 78.56 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 982 | 78.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |