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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0809500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.35 (0.0312) R2 : 0.00261
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0718 (0.0657) R2dN8 : 0.00337 R2N8 : 0.00261
σ : 0.587
deviance : 158.33
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
152.71 0.581 3.37 0.196 0.173 0.27 -0.334 1.28 0.0413 5.45 90.86 5886 -- --
154.97 0.58 3.36 0.126 0.185 0.325 -0.354 -- 0.0206 5.66 106.8 6651 -- --
152.95 0.576 3.37 0.213 0.175 0.259 -- 1.3 0.0439 5.67 101.7 5936 -- --
155.26 0.58 3.36 0.124 0.188 0.326 -- -- 0.0168 6.15 108.2 6651 -- --
154.49 0.579 3.37 0.218 -- 0.258 -- 1.32 0.0492 -- 108.8 5850 -- --
156.26 0.586 3.35 0.09 0.174 -- -0.351 -- 0.0765 5.38 -- -- -- --
156.55 0.586 3.35 0.0895 0.172 -- -- -- 0.0782 5.61 -- -- -- --
156.81 0.583 3.36 0.13 -- 0.311 -- -- 0.02 -- 116.9 6981 -- --
155.65 0.581 3.36 -- 0.188 0.297 -- -- 0.00929 6.06 114.1 6650 -- --
158.1 0.588 3.35 0.0951 -- -- -- -- 0.0823 -- -- -- -- --
156.77 0.586 3.35 -- 0.174 -- -- -- 0.0682 5.58 -- -- -- --
157.14 0.584 3.37 -- -- 0.299 -- -- 0.00357 -- 127.1 5575 -- --
158.33 0.587 3.35 -- -- -- -- -- 0.0718 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 144.25 radiation 1.0 43200 < th dose dependent rect. 3 1
2 144.27 atmosphere 1000.0 30 > th dose independent rect. 3 23
3 144.35 atmosphere 1005.0 90 > th dose dependent rect. 2 1
5 144.73 radiation 1.0 4320 < th dose dependent rect. 3 1
16 144.87 wind 9.0 1440 < th dose independent rect. 3 1
17 144.87 temperature 10.0 1440 > th dose independent rect. 3 1
20 144.87 temperature 30.0 1440 < th dose independent rect. 3 1
24 144.87 humidity 50.0 1440 > th dose independent rect. 3 1
33 144.87 atmosphere 995.0 1440 > th dose independent rect. 3 1
34 144.87 radiation 1.0 1440 < th dose independent rect. 3 1
54 144.87 temperature 10.0 1440 > th dose independent rect. 4 23
65 144.90 temperature 25.0 90 > th dose independent rect. 2 1
66 144.95 humidity 80.0 720 > th dose dependent rect. 12 1
67 144.97 temperature 20.0 30 > th dose dependent rect. 2 1
72 145.04 atmosphere 1005.0 30 > th dose independent rect. 2 1
75 145.06 wind 3.0 30 < th dose independent rect. 2 1
79 145.08 wind 5.0 30 < th dose dependent rect. 2 1
85 145.12 humidity 90.0 30 > th dose independent rect. 2 1
86 145.12 humidity 70.0 30 > th dose dependent rect. 2 1
88 145.13 temperature 10.0 30 > th dose independent rect. 2 1
90 145.13 temperature 30.0 30 < th dose independent rect. 2 1
91 145.13 humidity 50.0 30 > th dose independent rect. 2 1
95 145.13 atmosphere 1010.0 30 < th dose independent rect. 2 1
97 145.13 radiation 1.0 30 < th dose independent rect. 2 1
102 145.13 precipitation 0.1 30 < th dose independent rect. 2 1
103 145.13 temperature 10.0 30 > th dose independent rect. 3 23
104 145.13 humidity 50.0 30 > th dose dependent rect. 2 1
106 145.13 radiation 1.0 30 < th dose dependent rect. 2 1
111 145.13 precipitation 0.1 30 < th dose dependent rect. 2 1
118 145.28 atmosphere 1015.0 30 < th dose dependent rect. 2 1
120 145.32 precipitation 0.1 720 < th dose independent rect. 15 8
121 145.32 precipitation 0.1 720 < th dose dependent rect. 15 8
123 145.38 wind 1.0 30 > th dose independent rect. 2 1
124 145.38 temperature 30.0 30 < th dose dependent rect. 2 1
132 145.58 precipitation 0.1 30 < th dose independent rect. 3 23
133 145.58 precipitation 0.1 30 < th dose dependent rect. 3 23
151 145.85 temperature 10.0 720 > th dose independent rect. 15 8
152 145.85 temperature 10.0 720 > th dose independent rect. 23 16
180 145.94 temperature 10.0 720 > th dose independent rect. 3 8
181 145.94 atmosphere 995.0 720 > th dose independent rect. 3 8
182 145.94 temperature 10.0 720 > th dose independent rect. 11 16
183 145.94 atmosphere 995.0 720 > th dose independent rect. 23 16
187 146.19 humidity 50.0 720 > th dose independent rect. 3 8
188 146.27 radiation 10.0 10 > th dose independent rect. 6 1
214 146.27 wind 9.0 30 < th dose independent rect. 3 23
215 146.27 radiation 10.0 10 > th dose dependent rect. 6 1
242 146.31 wind 9.0 720 < th dose independent rect. 3 8
243 146.32 precipitation 0.1 720 < th dose independent rect. 11 16
244 146.32 precipitation 0.1 720 < th dose dependent rect. 11 16
247 146.41 humidity 80.0 720 > th dose independent rect. 12 1
262 147.48 atmosphere 995.0 720 > th dose independent rect. 15 8
263 147.48 atmosphere 1015.0 720 < th dose independent rect. 3 8
265 147.60 atmosphere 995.0 720 > th dose independent rect. 11 16
267 147.70 radiation 40.0 720 < th dose independent rect. 15 8
268 147.72 humidity 50.0 30 > th dose independent rect. 3 23
277 148.39 atmosphere 995.0 720 > th dose independent rect. 7 8
278 148.43 precipitation 0.1 720 < th dose independent rect. 19 8
280 148.43 precipitation 0.1 720 < th dose dependent rect. 19 8
281 148.44 precipitation 0.1 720 < th dose independent rect. 3 8
282 148.44 precipitation 0.1 720 < th dose dependent rect. 3 8
284 148.66 wind 9.0 720 < th dose independent rect. 19 8
286 148.70 temperature 10.0 720 > th dose independent rect. 7 8
287 148.70 atmosphere 1015.0 720 < th dose independent rect. 7 8
288 148.70 temperature 10.0 720 > th dose independent rect. 15 16
291 148.73 atmosphere 995.0 720 > th dose independent rect. 15 16
293 148.79 precipitation 0.1 720 < th dose independent rect. 15 16
294 148.79 precipitation 0.1 720 < th dose dependent rect. 15 16
296 148.83 precipitation 0.1 720 < th dose independent rect. 7 8
297 148.83 precipitation 0.1 720 < th dose dependent rect. 7 8
323 148.88 atmosphere 995.0 720 > th dose independent rect. 3 16
324 148.88 precipitation 0.1 720 < th dose independent rect. 23 16
325 148.88 precipitation 0.1 720 < th dose dependent rect. 23 16
326 148.89 radiation 1.0 720 < th dose dependent rect. 19 8
327 148.90 wind 9.0 720 < th dose independent rect. 15 8
328 148.90 temperature 10.0 720 > th dose independent rect. 19 8
329 148.90 temperature 30.0 720 < th dose independent rect. 19 8
330 148.90 humidity 50.0 720 > th dose independent rect. 19 8
331 148.90 atmosphere 995.0 720 > th dose independent rect. 19 8
332 148.90 radiation 1.0 720 < th dose independent rect. 19 8
337 148.90 temperature 10.0 720 > th dose independent rect. 3 16
346 149.12 temperature 25.0 1440 > th dose dependent rect. 4 1
347 149.14 radiation 10.0 30 < th dose dependent rect. 3 23
351 149.29 wind 1.0 720 > th dose independent rect. 15 8
353 149.32 humidity 90.0 90 < th dose independent rect. 2 1
362 149.87 precipitation 0.1 720 < th dose independent rect. 3 16
363 149.87 precipitation 0.1 720 < th dose dependent rect. 3 16
364 149.92 radiation 10.0 30 < th dose independent rect. 3 23
369 150.14 wind 9.0 720 < th dose independent rect. 23 16
377 150.42 temperature 25.0 1440 > th dose independent rect. 4 1
380 150.51 humidity 50.0 720 > th dose independent rect. 5 8
382 150.55 wind 3.0 30 < th dose dependent rect. 2 6
389 150.64 temperature 30.0 30 < th dose independent rect. 3 23
395 150.75 wind 9.0 720 < th dose independent rect. 15 16
396 150.76 wind 3.0 30 < th dose dependent rect. 6 1
397 150.78 temperature 10.0 720 > th dose independent rect. 17 8
398 150.78 radiation 30.0 720 < th dose independent rect. 17 8
400 150.78 temperature 10.0 720 > th dose independent rect. 1 16
404 150.82 temperature 30.0 720 < th dose independent rect. 15 16
406 150.84 atmosphere 1005.0 10 > th dose dependent rect. 2 6
409 150.86 temperature 25.0 1440 > th dose dependent rect. 2 1
411 150.88 humidity 50.0 720 > th dose independent rect. 23 16
414 150.90 atmosphere 1005.0 30 > th dose dependent rect. 6 1
415 150.91 wind 7.0 1440 < th dose independent rect. 23 1
416 150.91 atmosphere 1015.0 720 < th dose independent rect. 3 16
423 150.96 temperature 10.0 720 > th dose independent rect. 5 8
424 150.96 atmosphere 995.0 720 > th dose independent rect. 5 8
425 150.96 atmosphere 1015.0 720 < th dose independent rect. 5 8
426 150.96 temperature 10.0 720 > th dose independent rect. 13 16
428 150.98 radiation 40.0 720 < th dose independent rect. 15 16
435 151.07 humidity 90.0 30 < th dose dependent rect. 22 1
442 151.12 humidity 90.0 30 < th dose independent rect. 22 1
444 151.14 temperature 25.0 30 > th dose dependent rect. 22 1
446 151.17 temperature 10.0 1440 > th dose independent rect. 23 1
449 151.17 temperature 30.0 1440 < th dose independent rect. 23 1
453 151.17 humidity 50.0 1440 > th dose independent rect. 23 1
463 151.17 atmosphere 995.0 1440 > th dose independent rect. 23 1
464 151.17 radiation 1.0 1440 < th dose independent rect. 23 1
484 151.17 temperature 10.0 1440 > th dose independent rect. 24 23
487 151.17 radiation 1.0 1440 < th dose dependent rect. 23 1
492 151.19 atmosphere 1005.0 30 > th dose dependent rect. 22 1
495 151.21 atmosphere 1005.0 30 > th dose independent rect. 22 1
496 151.22 wind 1.0 30 > th dose independent rect. 22 1
498 151.22 wind 9.0 720 < th dose independent rect. 11 16
500 151.23 temperature 15.0 30 > th dose dependent rect. 22 1
504 151.23 wind 9.0 30 < th dose dependent rect. 3 23
509 151.25 temperature 20.0 30 > th dose independent rect. 22 1
510 151.25 wind 1.0 30 > th dose dependent rect. 22 1
512 151.26 wind 7.0 30 < th dose independent rect. 22 1
514 151.26 temperature 10.0 30 > th dose independent rect. 22 1
517 151.26 temperature 30.0 30 < th dose independent rect. 22 1
518 151.26 humidity 50.0 30 > th dose independent rect. 22 1
522 151.26 atmosphere 995.0 30 > th dose independent rect. 22 1
523 151.26 atmosphere 1010.0 30 < th dose independent rect. 22 1
525 151.26 radiation 1.0 30 < th dose independent rect. 22 1
530 151.26 precipitation 0.1 30 < th dose independent rect. 22 1
531 151.26 atmosphere 995.0 720 > th dose independent rect. 17 8
532 151.26 temperature 10.0 30 > th dose independent rect. 23 23
533 151.26 radiation 1.0 30 < th dose dependent rect. 22 1
538 151.26 precipitation 0.1 30 < th dose dependent rect. 22 1
542 151.29 temperature 30.0 720 < th dose independent rect. 15 8
543 151.29 wind 9.0 30 < th dose dependent rect. 22 1
548 151.31 precipitation 0.1 720 < th dose independent rect. 5 8
551 151.31 precipitation 0.1 720 < th dose dependent rect. 5 8
553 151.33 humidity 50.0 30 > th dose dependent rect. 22 1
559 151.36 atmosphere 995.0 720 > th dose independent rect. 1 16
563 151.40 atmosphere 1015.0 30 < th dose dependent rect. 22 1
570 151.46 humidity 90.0 90 < th dose independent rect. 1 3
571 151.46 temperature 10.0 30 > th dose dependent rect. 3 23
574 151.47 temperature 30.0 30 < th dose dependent rect. 22 1
576 151.48 atmosphere 995.0 720 > th dose independent rect. 13 16
577 151.48 atmosphere 1015.0 30 < th dose independent rect. 3 23
578 151.51 wind 1.0 10 < th dose independent rect. 6 21
580 151.52 precipitation 0.1 720 < th dose independent rect. 1 16
581 151.52 precipitation 0.1 720 < th dose dependent rect. 1 16
592 151.61 humidity 90.0 90 < th dose independent rect. 1 6
596 151.61 temperature 25.0 30 > th dose dependent rect. 17 18
599 151.62 wind 9.0 30 < th dose independent rect. 23 23
600 151.63 wind 1.0 10 < th dose independent rect. 2 5
604 151.65 temperature 25.0 1440 > th dose independent rect. 2 1
605 151.65 humidity 80.0 30 > th dose dependent rect. 6 1
637 151.77 temperature 25.0 4320 < th dose independent rect. 1 1
656 151.89 wind 1.0 10 < th dose independent rect. 13 14
675 151.90 wind 1.0 10 > th dose independent rect. 23 23
684 151.91 humidity 80.0 720 > th dose dependent rect. 3 1
688 151.92 temperature 25.0 720 > th dose dependent rect. 3 5
696 151.96 temperature 10.0 720 > th dose dependent rect. 3 1
699 151.97 atmosphere 995.0 30 > th dose independent rect. 23 23
724 152.06 humidity 90.0 10 > th dose independent rect. 23 4
725 152.06 temperature 25.0 270 > th dose independent rect. 22 5
732 152.09 precipitation 0.1 720 < th dose independent rect. 17 8
734 152.09 precipitation 0.1 720 < th dose dependent rect. 17 8
737 152.10 temperature 25.0 30 > th dose dependent rect. 24 11
742 152.13 wind 1.0 10 < th dose independent rect. 6 1
750 152.15 humidity 50.0 720 > th dose independent rect. 7 8
787 152.19 temperature 25.0 720 > th dose independent rect. 3 6
803 152.21 wind 9.0 720 < th dose independent rect. 7 8
804 152.21 atmosphere 1000.0 30 > th dose independent rect. 17 9
816 152.26 humidity 90.0 720 > th dose independent rect. 3 1
817 152.26 radiation 40.0 90 < th dose independent rect. 12 15
822 152.27 wind 3.0 30 < th dose dependent rect. 2 11
835 152.33 wind 1.0 10 > th dose independent rect. 17 13
840 152.35 temperature 30.0 30 < th dose dependent rect. 6 1
847 152.37 wind 1.0 14400 < th dose dependent rect. 6 1
856 152.40 humidity 70.0 14400 > th dose independent rect. 8 1
876 152.45 wind 1.0 10 < th dose independent rect. 8 19
877 152.46 humidity 70.0 14400 < th dose independent rect. 8 1
884 152.46 humidity 80.0 14400 < th dose dependent rect. 4 5
887 152.47 humidity 80.0 14400 < th dose dependent rect. 7 2
890 152.48 atmosphere 1010.0 10 < th dose independent rect. 3 9
893 152.49 wind 9.0 720 < th dose independent rect. 5 8
925 152.52 radiation 10.0 30 < th dose independent rect. 17 9
926 152.52 precipitation 0.1 720 < th dose independent rect. 13 16
937 152.52 precipitation 0.1 720 < th dose dependent rect. 13 16
949 152.54 humidity 70.0 14400 > th dose independent rect. 4 5
971 152.57 wind 9.0 10 < th dose independent rect. 17 9
972 152.57 precipitation 0.1 30 < th dose independent rect. 2 15
976 152.57 precipitation 0.1 30 < th dose dependent rect. 2 15
981 152.58 humidity 50.0 30 > th dose independent rect. 17 9
992 152.59 radiation 20.0 10 < th dose dependent rect. 17 9