Os02g0806000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os02g0806000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.8 | 0.265 | 11.6 | -0.353 | 0.587 | -0.855 | 0.136 | 0.385 | -0.355 | 17.6 | 14.21 | 254 | -- | -- |
| 32.3 | 0.265 | 11.6 | -0.354 | 0.602 | -0.819 | -0.124 | -- | -0.354 | 17.3 | 14.72 | 258 | -- | -- |
| 31.84 | 0.263 | 11.6 | -0.353 | 0.593 | -0.847 | -- | 0.344 | -0.354 | 17.5 | 14.29 | 252 | -- | -- |
| 32.33 | 0.265 | 11.6 | -0.352 | 0.585 | -0.842 | -- | -- | -0.354 | 17.5 | 14.25 | 258 | -- | -- |
| 37.63 | 0.286 | 11.6 | -0.391 | -- | -1.2 | -- | 0.677 | -0.388 | -- | 12.28 | 384 | -- | -- |
| 39.41 | 0.294 | 11.6 | -0.303 | 1.32 | -- | -0.248 | -- | -0.308 | 15.4 | -- | -- | -- | -- |
| 39.6 | 0.295 | 11.6 | -0.307 | 1.32 | -- | -- | -- | -0.309 | 15.4 | -- | -- | -- | -- |
| 36.58 | 0.282 | 11.6 | -0.314 | -- | -1.26 | -- | -- | -0.379 | -- | 10.68 | 402 | -- | -- |
| 35.45 | 0.277 | 11.6 | -- | 0.551 | -0.878 | -- | -- | -0.314 | 18 | 10.29 | 266 | -- | -- |
| 137.22 | 0.547 | 11.6 | -0.363 | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
| 42.09 | 0.303 | 11.6 | -- | 1.32 | -- | -- | -- | -0.275 | 15.4 | -- | -- | -- | -- |
| 38.94 | 0.291 | 11.6 | -- | -- | -1.27 | -- | -- | -0.34 | -- | 9.993 | 413 | -- | -- |
| 140.69 | 0.554 | 11.6 | -- | -- | -- | -- | -- | -0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.85 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 2 | 27.87 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 4 | 28.14 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 5 | 28.16 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 6 | 28.17 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 19 | 28.56 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 20 | 28.58 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 26 | 28.65 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 27 | 28.66 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 33 | 28.71 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 46 | 28.84 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 83 | 29.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 88 | 29.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 93 | 29.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 97 | 29.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 101 | 29.33 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 102 | 29.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 103 | 29.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 106 | 29.35 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 139 | 29.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 147 | 29.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 148 | 29.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 149 | 29.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 183 | 29.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 191 | 29.93 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 196 | 29.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 211 | 30.05 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 222 | 30.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 226 | 30.10 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 233 | 30.12 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 241 | 30.15 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 248 | 30.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 262 | 30.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 263 | 30.25 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 20 |
| 285 | 30.35 | radiation | 10.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 287 | 30.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 293 | 30.38 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 315 | 30.44 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 381 | 30.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 6 |
| 382 | 30.64 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 385 | 30.65 | wind | 7.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 386 | 30.65 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 398 | 30.68 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 399 | 30.68 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 402 | 30.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 11 |
| 406 | 30.71 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 408 | 30.71 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 409 | 30.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 415 | 30.73 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 422 | 30.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 433 | 30.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 434 | 30.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 435 | 30.76 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 438 | 30.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 481 | 30.83 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 501 | 30.85 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 515 | 30.88 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 516 | 30.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 20 |
| 520 | 30.89 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 533 | 30.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 543 | 30.94 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 551 | 30.96 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 603 | 31.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 6 |
| 607 | 31.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 635 | 31.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 636 | 31.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 637 | 31.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 640 | 31.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 641 | 31.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 648 | 31.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 683 | 31.11 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 698 | 31.13 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 700 | 31.13 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 708 | 31.15 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 713 | 31.15 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 715 | 31.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 729 | 31.18 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 738 | 31.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 796 | 31.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 797 | 31.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 802 | 31.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 805 | 31.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 815 | 31.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 816 | 31.28 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 836 | 31.30 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 864 | 31.34 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 868 | 31.34 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 879 | 31.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 2 |
| 881 | 31.36 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 983 | 31.45 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 997 | 31.49 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 2 |