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Os02g0805000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Adaptin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.74 (0.0187) R2 : 0.152
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.357 (0.0394) R2dN8 : 0.197 R2N8 : 0.152
σ : 0.353
deviance : 57.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.07 0.29 9.76 0.333 0.265 -0.435 0.206 0.579 0.332 2.76 1009 3772 -- --
38.87 0.29 9.74 0.457 0.273 -0.471 0.162 -- 0.374 2.73 1009 3464 -- --
38.22 0.288 9.76 0.333 0.265 -0.434 -- 0.554 0.332 2.73 1009 3772 -- --
38.94 0.291 9.74 0.454 0.26 -0.471 -- -- 0.388 2.75 1008 3430 -- --
42.19 0.303 9.75 0.313 -- -0.474 -- 0.611 0.378 -- 1008 3542 -- --
43.86 0.31 9.73 0.554 0.287 -- 0.142 -- 0.413 2.85 -- -- -- --
43.93 0.31 9.73 0.551 0.288 -- -- -- 0.412 2.85 -- -- -- --
42.83 0.305 9.73 0.445 -- -0.508 -- -- 0.42 -- 1008 3373 -- --
39.73 0.294 9.78 -- 0.276 -0.561 -- -- 0.195 2.88 1008 47520 -- --
48.71 0.326 9.73 0.563 -- -- -- -- 0.419 -- -- -- -- --
51.92 0.337 9.74 -- 0.298 -- -- -- 0.351 2.87 -- -- -- --
44.12 0.309 9.78 -- -- -0.579 -- -- 0.191 -- 1008 47520 -- --
57.07 0.353 9.74 -- -- -- -- -- 0.357 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.91 temperature 30 720 > th dose dependent rect. 18 1
15 36.07 wind 1 270 < th dose independent rect. 4 1
16 36.19 wind 1 270 < th dose dependent rect. 4 1
18 36.34 temperature 15 30 > th dose independent rect. 5 23
34 36.45 humidity 80 720 < th dose dependent rect. 18 3
38 36.61 wind 1 90 < th dose dependent rect. 4 3
45 36.90 wind 1 90 < th dose independent rect. 4 3
50 36.94 humidity 70 720 > th dose independent rect. 19 8
54 37.02 temperature 30 720 < th dose dependent rect. 9 14
57 37.06 temperature 30 720 < th dose dependent sin 20 NA
61 37.09 wind 1 90 < th dose dependent rect. 4 10
63 37.11 humidity 80 720 < th dose dependent rect. 18 14
68 37.13 humidity 70 720 < th dose independent rect. 18 14
71 37.15 temperature 30 720 < th dose dependent rect. 11 10
78 37.18 wind 1 90 < th dose dependent rect. 4 17
87 37.20 temperature 25 720 > th dose dependent rect. 20 1
107 37.23 humidity 70 720 < th dose independent rect. 18 2
135 37.25 wind 1 90 < th dose dependent rect. 4 6
136 37.26 wind 1 90 < th dose independent rect. 4 10
153 37.29 wind 1 90 < th dose dependent rect. 4 21
154 37.30 temperature 30 720 > th dose independent rect. 18 1
173 37.31 temperature 10 720 > th dose dependent rect. 11 11
174 37.31 temperature 10 720 > th dose dependent rect. 10 13
184 37.34 humidity 60 14400 < th dose independent rect. 18 14
191 37.36 humidity 60 14400 > th dose independent rect. 18 10
198 37.37 humidity 60 14400 > th dose independent rect. 18 14
206 37.39 humidity 70 720 > th dose independent rect. 15 10
213 37.40 humidity 60 14400 < th dose independent rect. 18 1
214 37.40 humidity 60 14400 > th dose independent rect. 18 3
217 37.40 humidity 70 14400 < th dose dependent rect. 18 3
245 37.44 humidity 70 720 > th dose independent rect. 15 12
246 37.44 wind 9 14400 > th dose dependent rect. 16 1
250 37.45 wind 1 1440 < th dose dependent rect. 4 2
252 37.46 humidity 70 14400 < th dose independent rect. 19 3
259 37.46 temperature 30 720 < th dose independent rect. 17 10
265 37.47 humidity 50 1440 < th dose independent rect. 16 1
266 37.47 temperature 30 720 < th dose dependent rect. 15 5
283 37.49 wind 1 90 < th dose independent rect. 4 6
294 37.51 humidity 90 90 > th dose dependent rect. 4 1
316 37.54 humidity 80 720 > th dose independent rect. 6 16
317 37.54 humidity 50 1440 < th dose dependent rect. 16 1
318 37.54 temperature 30 720 < th dose dependent rect. 17 2
328 37.56 wind 9 14400 > th dose independent rect. 16 1
341 37.60 radiation 1 720 > th dose dependent rect. 18 1
342 37.60 temperature 10 1440 > th dose dependent rect. 11 2
370 37.64 radiation 1 720 > th dose independent rect. 18 11
372 37.64 temperature 10 1440 > th dose dependent rect. 10 4
375 37.65 atmosphere 1010 4320 > th dose dependent rect. 23 1
397 37.69 humidity 80 720 > th dose independent rect. 6 10
404 37.70 humidity 70 720 > th dose independent sin 13 NA
405 37.70 radiation 1 720 > th dose independent rect. 18 1
426 37.72 humidity 80 720 > th dose independent rect. 6 19
444 37.75 temperature 15 720 > th dose dependent rect. 18 5
447 37.76 radiation 1 720 < th dose independent rect. 10 4
448 37.76 radiation 1 4320 > th dose dependent rect. 4 2
453 37.76 radiation 1 720 < th dose dependent rect. 10 4
465 37.77 humidity 90 10 > th dose independent rect. 4 2
475 37.78 wind 9 14400 < th dose independent rect. 16 1
507 37.80 humidity 50 14400 < th dose dependent rect. 16 19
518 37.82 temperature 20 90 > th dose dependent rect. 4 1
547 37.85 radiation 40 14400 > th dose dependent rect. 8 1
572 37.86 radiation 40 14400 > th dose dependent rect. 15 18
583 37.88 temperature 15 1440 > th dose independent rect. 4 16
584 37.88 temperature 15 1440 > th dose independent rect. 4 20
588 37.88 humidity 70 1440 > th dose dependent rect. 8 5
598 37.89 humidity 80 1440 > th dose independent rect. 7 6
634 37.91 humidity 80 720 > th dose independent sin 0 NA
663 37.92 humidity 70 1440 > th dose dependent rect. 7 7
687 37.94 radiation 20 4320 < th dose dependent rect. 24 6
708 37.95 humidity 80 1440 < th dose independent rect. 7 6
713 37.95 humidity 70 720 > th dose independent rect. 15 18
723 37.95 radiation 20 14400 > th dose dependent rect. 17 14
731 37.96 radiation 20 4320 < th dose dependent rect. 2 4
742 37.97 radiation 30 14400 < th dose independent rect. 16 12
748 37.97 radiation 20 4320 < th dose dependent rect. 19 11
756 37.98 humidity 70 720 > th dose independent rect. 15 5
782 37.99 wind 1 90 < th dose independent rect. 4 21
804 38.00 humidity 90 10 > th dose dependent rect. 4 2
814 38.01 radiation 30 14400 < th dose independent rect. 16 2
818 38.01 temperature 15 720 > th dose dependent sin 19 NA
831 38.02 wind 1 1440 > th dose independent rect. 4 1
835 38.02 atmosphere 1010 4320 > th dose dependent sin 12 NA
837 38.02 atmosphere 1010 4320 > th dose dependent rect. 1 1
839 38.02 radiation 20 4320 < th dose dependent rect. 4 2
871 38.04 radiation 1 720 < th dose independent rect. 13 1
874 38.04 radiation 30 14400 < th dose independent rect. 16 5
888 38.04 radiation 20 14400 > th dose dependent rect. 6 1
889 38.04 radiation 1 720 < th dose dependent rect. 13 1
963 38.07 wind 1 1440 < th dose independent rect. 4 1
965 38.07 temperature 15 1440 > th dose independent rect. 4 5
989 38.08 radiation 1 720 > th dose independent rect. 9 21