Os02g0804600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Molybdenum cofactor biosynthesis domain containing protein.
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Os02g0804600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Molybdenum cofactor biosynthesis domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.65 | 0.243 | 11.5 | 0.745 | 1.12 | -0.978 | 0.135 | -2.48 | 0.42 | 5.52 | 20 | 5690 | -- | -- |
| 31.59 | 0.262 | 11.6 | 0.537 | 1.13 | -0.421 | 0.26 | -- | 0.37 | 5.62 | 24.8 | 5553 | -- | -- |
| 26.61 | 0.24 | 11.5 | 0.733 | 1.12 | -1.01 | -- | -2.55 | 0.419 | 5.5 | 19.98 | 5757 | -- | -- |
| 31.41 | 0.261 | 11.6 | 0.53 | 1.13 | -0.462 | -- | -- | 0.371 | 5.55 | 24.71 | 4886 | -- | -- |
| 91.58 | 0.446 | 11.6 | 0.707 | -- | -1.04 | -- | -2.45 | 0.434 | -- | 20 | 5669 | -- | -- |
| 37.52 | 0.287 | 11.6 | 0.729 | 1.13 | -- | 0.131 | -- | 0.475 | 5.46 | -- | -- | -- | -- |
| 37.56 | 0.287 | 11.6 | 0.729 | 1.13 | -- | -- | -- | 0.475 | 5.46 | -- | -- | -- | -- |
| 90.76 | 0.444 | 11.7 | 0.5 | -- | -0.518 | -- | -- | 0.266 | -- | 24.07 | 2719 | -- | -- |
| 28.71 | 0.25 | 11.7 | -- | 1.13 | -0.71 | -- | -- | 0.119 | 5.51 | 24.7 | 40762 | -- | -- |
| 104.04 | 0.477 | 11.6 | 0.767 | -- | -- | -- | -- | 0.502 | -- | -- | -- | -- | -- |
| 51.56 | 0.336 | 11.6 | -- | 1.14 | -- | -- | -- | 0.393 | 5.43 | -- | -- | -- | -- |
| 94.28 | 0.452 | 11.7 | -- | -- | -0.744 | -- | -- | 0.134 | -- | 24 | 47520 | -- | -- |
| 119.54 | 0.51 | 11.7 | -- | -- | -- | -- | -- | 0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 25.84 | temperature | 15 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 199 | 26.64 | temperature | 25 | 4320 | < th | dose dependent | sin | 10 | NA |
| 257 | 26.80 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 271 | 26.84 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 272 | 26.84 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 277 | 26.85 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 286 | 26.86 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 320 | 26.90 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 322 | 26.90 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 408 | 26.95 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 10 | NA |
| 431 | 26.95 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 440 | 26.96 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 10 | NA |
| 548 | 27.00 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 644 | 27.03 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 664 | 27.03 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 2 | 22 |
| 698 | 27.04 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 5 | 19 |
| 722 | 27.05 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |
| 723 | 27.05 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 741 | 27.05 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 8 | 22 |
| 764 | 27.05 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 11 |
| 783 | 27.06 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 791 | 27.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 819 | 27.07 | atmosphere | 1015 | 43200 | > th | dose independent | no | NA | NA |
| 859 | 27.07 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 902 | 27.08 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 9 | 21 |