Os02g0803800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0803800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.14 | 0.415 | 2.84 | 0.0953 | 0.14 | -0.0987 | 0.294 | -0.715 | 0.0309 | 3.63 | 90.17 | 300 | -- | -- |
| 79.57 | 0.415 | 2.83 | 0.0381 | 0.112 | -0.111 | -0.0818 | -- | 0.0264 | 3.38 | 90.98 | 373 | -- | -- |
| 78.31 | 0.412 | 2.84 | 0.0852 | 0.13 | -0.0912 | -- | -0.606 | 0.0317 | 3.41 | 90 | 333 | -- | -- |
| 79.59 | 0.416 | 2.83 | 0.0435 | 0.118 | -0.117 | -- | -- | 0.0231 | 3.78 | 91 | 375 | -- | -- |
| 78.92 | 0.414 | 2.83 | 0.089 | -- | -0.0396 | -- | -0.625 | 0.0456 | -- | 89.25 | 479 | -- | -- |
| 79.98 | 0.419 | 2.83 | 0.0195 | 0.0677 | -- | -0.12 | -- | 0.044 | 2.11 | -- | -- | -- | -- |
| 80.03 | 0.419 | 2.83 | 0.0231 | 0.0674 | -- | -- | -- | 0.0448 | 1.61 | -- | -- | -- | -- |
| 79.44 | 0.415 | 2.83 | 0.0766 | -- | -0.178 | -- | -- | 0.0345 | -- | 89.96 | 1086 | -- | -- |
| 79.64 | 0.416 | 2.83 | -- | 0.116 | -0.11 | -- | -- | 0.0214 | 3.66 | 91 | 373 | -- | -- |
| 80.3 | 0.419 | 2.83 | 0.0258 | -- | -- | -- | -- | 0.0463 | -- | -- | -- | -- | -- |
| 80.04 | 0.419 | 2.83 | -- | 0.0678 | -- | -- | -- | 0.0423 | 1.62 | -- | -- | -- | -- |
| 79.47 | 0.415 | 2.83 | -- | -- | -0.202 | -- | -- | 0.0165 | -- | 89.39 | 1086 | -- | -- |
| 80.32 | 0.418 | 2.83 | -- | -- | -- | -- | -- | 0.0434 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.44 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 74.47 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 6 | 74.57 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 7 | 74.61 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 8 | 74.62 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 9 | 74.64 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 10 | 74.64 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 74.64 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 13 | 74.64 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 16 | 74.64 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 17 | 74.64 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 19 | 74.64 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 24 | 74.64 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 25 | 74.64 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 26 | 74.64 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 31 | 74.64 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 34 | 74.66 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 36 | 74.67 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 41 | 74.74 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 46 | 74.80 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 53 | 74.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 55 | 75.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 57 | 75.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 88 | 75.46 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 106 | 75.93 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 5 |
| 129 | 76.49 | humidity | 90.0 | 270 | > th | dose independent | rect. | 19 | 4 |
| 132 | 76.51 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 133 | 76.54 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 134 | 76.55 | wind | 3.0 | 30 | < th | dose independent | rect. | 23 | 1 |
| 136 | 76.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 139 | 76.64 | humidity | 90.0 | 270 | > th | dose independent | rect. | 20 | 2 |
| 143 | 76.65 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 182 | 76.96 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 189 | 77.00 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 227 | 77.21 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 1 |
| 242 | 77.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 265 | 77.35 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 295 | 77.44 | humidity | 90.0 | 270 | > th | dose independent | sin | 16 | NA |
| 296 | 77.44 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 309 | 77.49 | wind | 3.0 | 10 | < th | dose independent | rect. | 23 | 4 |
| 317 | 77.51 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 348 | 77.58 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 360 | 77.60 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 365 | 77.60 | humidity | 90.0 | 720 | < th | dose independent | rect. | 16 | 5 |
| 370 | 77.61 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 381 | 77.63 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 410 | 77.67 | humidity | 90.0 | 270 | > th | dose independent | rect. | 19 | 10 |
| 411 | 77.67 | wind | 3.0 | 270 | < th | dose dependent | rect. | 20 | 1 |
| 433 | 77.71 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 471 | 77.75 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 23 | 1 |
| 478 | 77.75 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 498 | 77.77 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 506 | 77.78 | wind | 3.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 528 | 77.79 | humidity | 90.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 529 | 77.79 | wind | 5.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 537 | 77.80 | temperature | 20.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 548 | 77.80 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 584 | 77.83 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 670 | 77.88 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 4 |
| 717 | 77.92 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 738 | 77.93 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 745 | 77.93 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 24 | 7 |
| 748 | 77.94 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 807 | 77.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 808 | 77.97 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 868 | 78.01 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 873 | 78.02 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 4 |
| 876 | 78.02 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 893 | 78.03 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 916 | 78.04 | humidity | 90.0 | 270 | < th | dose independent | sin | 12 | NA |
| 919 | 78.04 | wind | 3.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 941 | 78.05 | humidity | 90.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 960 | 78.06 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 23 | 1 |
| 990 | 78.07 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 24 | 14 |