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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0801600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.34 (0.0349) R2 : 0.00534
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.115 (0.0734) R2dN8 : 0.0069 R2N8 : 0.00534
σ : 0.656
deviance : 197.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.3 0.629 3.45 -0.201 0.212 0.967 -0.045 2.92 -0.0789 9.29 5.299 5255 -- --
187.26 0.637 3.38 -0.0955 0.171 0.912 -0.34 -- -0.0527 10.3 5.21 5226 -- --
179.3 0.624 3.45 -0.202 0.212 0.966 -- 2.93 -0.0787 9.25 5.295 5255 -- --
186.06 0.635 3.37 -0.184 0.216 0.744 -- -- 0.0117 9.51 5.218 5238 -- --
181.68 0.628 3.46 -0.234 -- 0.873 -- 2.9 -0.0842 -- 5.3 5359 -- --
190.17 0.646 3.35 -0.487 0.135 -- -0.18 -- 0.0597 9.32 -- -- -- --
190.27 0.646 3.35 -0.494 0.138 -- -- -- 0.059 8.81 -- -- -- --
187.69 0.638 3.36 -0.296 -- 0.495 -- -- 0.0449 -- 5.4 5262 -- --
187.03 0.637 3.36 -- 0.236 0.719 -- -- 0.0389 9.27 5.4 5226 -- --
191.36 0.646 3.35 -0.494 -- -- -- -- 0.06 -- -- -- -- --
196.71 0.656 3.34 -- 0.138 -- -- -- 0.114 9.08 -- -- -- --
189.08 0.64 3.34 -- -- 0.709 -- -- 0.114 -- 5.4 4462 -- --
197.8 0.656 3.34 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 176.49 atmosphere 1010.0 30 < th dose dependent rect. 2 1
2 176.60 temperature 20.0 10 > th dose dependent rect. 2 1
6 176.98 wind 3.0 30 < th dose independent rect. 2 1
9 177.08 wind 9.0 30 < th dose independent rect. 2 1
10 177.08 temperature 10.0 30 > th dose independent rect. 2 1
12 177.08 temperature 30.0 30 < th dose independent rect. 2 1
13 177.08 humidity 50.0 30 > th dose independent rect. 2 1
16 177.08 atmosphere 995.0 30 > th dose independent rect. 2 1
17 177.08 atmosphere 1010.0 30 < th dose independent rect. 2 1
19 177.08 radiation 1.0 30 < th dose independent rect. 2 1
24 177.08 precipitation 0.1 30 < th dose independent rect. 2 1
25 177.08 temperature 10.0 30 > th dose independent rect. 3 23
26 177.08 radiation 1.0 30 < th dose dependent rect. 2 1
31 177.08 precipitation 0.1 30 < th dose dependent rect. 2 1
34 177.11 wind 9.0 30 < th dose dependent rect. 2 1
35 177.11 wind 1.0 30 < th dose dependent rect. 10 17
40 177.18 temperature 25.0 30 > th dose independent rect. 1 8
42 177.19 humidity 50.0 30 > th dose dependent rect. 2 1
47 177.30 humidity 90.0 90 < th dose independent rect. 1 2
51 177.37 atmosphere 1005.0 30 > th dose dependent rect. 2 1
54 177.42 atmosphere 995.0 30 > th dose dependent rect. 2 1
56 177.44 wind 1.0 30 < th dose dependent rect. 22 5
58 177.47 wind 1.0 30 < th dose dependent rect. 7 20
60 177.49 temperature 30.0 30 < th dose dependent rect. 2 1
62 177.53 wind 1.0 30 > th dose independent rect. 2 1
64 177.56 wind 1.0 30 < th dose dependent rect. 17 10
101 177.71 temperature 10.0 10 > th dose dependent rect. 10 17
105 177.78 wind 9.0 30 < th dose independent rect. 3 23
110 177.94 atmosphere 995.0 30 > th dose dependent rect. 3 18
111 177.95 atmosphere 995.0 90 > th dose dependent rect. 3 6
122 178.26 atmosphere 1000.0 30 > th dose independent rect. 3 7
124 178.28 humidity 90.0 270 < th dose independent rect. 23 5
132 178.41 temperature 10.0 30 > th dose dependent rect. 21 6
148 178.75 humidity 90.0 270 < th dose dependent rect. 23 5
149 178.80 temperature 10.0 90 > th dose dependent rect. 3 6
161 179.05 wind 7.0 10 < th dose independent rect. 3 7
168 179.16 wind 9.0 10 < th dose dependent rect. 3 7
169 179.17 temperature 25.0 30 > th dose independent rect. 18 15
170 179.17 wind 1.0 10 < th dose independent rect. 11 16
177 179.25 temperature 10.0 10 > th dose dependent rect. 3 7
180 179.27 temperature 25.0 10 > th dose dependent rect. 18 15
182 179.29 radiation 20.0 10 < th dose independent rect. 3 6
184 179.29 temperature 25.0 10 > th dose dependent rect. 20 13
190 179.36 temperature 15.0 30 > th dose independent rect. 10 17
195 179.38 humidity 60.0 30 > th dose independent rect. 10 17
202 179.44 humidity 70.0 90 > th dose independent rect. 3 6
212 179.56 temperature 20.0 30 > th dose independent rect. 21 6
228 179.75 wind 1.0 10 < th dose independent rect. 22 5
269 180.05 atmosphere 1000.0 90 > th dose independent rect. 3 18
271 180.07 wind 3.0 270 < th dose dependent rect. 22 1
280 180.14 temperature 25.0 10 > th dose dependent rect. 23 10
295 180.23 wind 5.0 4320 < th dose independent rect. 14 10
299 180.26 wind 5.0 4320 < th dose independent rect. 14 14
300 180.26 atmosphere 1000.0 90 > th dose independent rect. 18 15
302 180.28 precipitation 0.1 10 < th dose independent rect. 10 17
303 180.28 precipitation 0.1 10 < th dose dependent rect. 10 17
308 180.31 temperature 25.0 4320 < th dose independent rect. 3 1
311 180.31 wind 1.0 30 < th dose independent rect. 7 20
315 180.32 temperature 10.0 30 > th dose independent rect. 3 7
317 180.32 humidity 50.0 30 > th dose independent rect. 3 7
319 180.32 atmosphere 1015.0 30 < th dose independent rect. 3 7
327 180.33 wind 5.0 4320 < th dose independent rect. 14 12
343 180.36 wind 7.0 1440 < th dose independent rect. 7 2
349 180.38 wind 3.0 4320 > th dose dependent rect. 14 15
350 180.39 precipitation 0.1 30 < th dose independent rect. 3 7
353 180.39 precipitation 0.1 30 < th dose dependent rect. 3 7
354 180.39 temperature 25.0 10 > th dose dependent rect. 1 8
373 180.46 radiation 20.0 10 < th dose independent rect. 18 15
375 180.47 atmosphere 1000.0 1440 < th dose dependent sin 12 NA
379 180.48 atmosphere 1000.0 1440 < th dose dependent rect. 20 18
380 180.49 wind 5.0 4320 < th dose independent sin 16 NA
386 180.51 humidity 60.0 270 > th dose independent rect. 21 14
388 180.52 temperature 30.0 90 < th dose independent rect. 3 6
390 180.52 wind 3.0 4320 > th dose dependent rect. 14 12
392 180.53 temperature 25.0 4320 > th dose independent rect. 3 1
393 180.53 atmosphere 1000.0 1440 < th dose dependent rect. 17 13
398 180.55 wind 5.0 4320 > th dose independent rect. 18 1
402 180.57 wind 5.0 4320 > th dose independent rect. 14 10
409 180.59 humidity 50.0 90 > th dose dependent rect. 18 15
414 180.60 atmosphere 1000.0 1440 < th dose dependent rect. 17 20
421 180.62 temperature 25.0 4320 > th dose independent rect. 3 3
422 180.62 wind 5.0 4320 > th dose independent rect. 14 14
439 180.66 wind 5.0 4320 > th dose independent rect. 14 12
465 180.74 wind 5.0 4320 > th dose independent sin 16 NA
468 180.75 atmosphere 995.0 30 > th dose independent rect. 10 17
469 180.75 wind 5.0 4320 < th dose independent rect. 14 19
476 180.76 wind 5.0 4320 < th dose independent rect. 18 1
481 180.76 atmosphere 995.0 1440 > th dose independent rect. 22 18
485 180.77 temperature 25.0 4320 < th dose independent rect. 3 3
489 180.78 wind 5.0 4320 > th dose independent rect. 16 4
491 180.78 atmosphere 1000.0 270 > th dose independent rect. 21 14
499 180.80 wind 5.0 4320 < th dose independent rect. 16 4
508 180.81 atmosphere 995.0 1440 > th dose independent rect. 11 5
524 180.83 atmosphere 1000.0 1440 < th dose dependent sin 6 NA
537 180.85 atmosphere 995.0 10 > th dose independent rect. 3 23
541 180.86 humidity 80.0 4320 < th dose independent rect. 16 1
549 180.87 radiation 10.0 4320 > th dose independent rect. 7 1
555 180.89 radiation 1.0 90 > th dose independent rect. 9 9
570 180.92 wind 7.0 1440 < th dose independent rect. 5 4
571 180.92 wind 5.0 4320 < th dose independent rect. 14 6
582 180.94 wind 1.0 90 > th dose independent rect. 3 6
587 180.95 temperature 30.0 10 < th dose independent rect. 3 7
614 180.99 wind 9.0 90 < th dose independent rect. 3 18
619 181.00 wind 5.0 4320 > th dose independent rect. 14 6
621 181.00 humidity 50.0 90 > th dose dependent rect. 3 6
625 181.01 wind 9.0 30 < th dose independent rect. 10 17
635 181.03 wind 5.0 4320 > th dose independent rect. 14 19
636 181.03 radiation 1.0 30 > th dose independent rect. 9 21
671 181.09 atmosphere 1000.0 270 > th dose dependent rect. 3 3
682 181.12 temperature 10.0 1440 > th dose independent rect. 4 7
685 181.12 atmosphere 995.0 1440 > th dose independent rect. 4 7
688 181.12 temperature 10.0 1440 > th dose independent rect. 11 17
692 181.12 wind 3.0 4320 > th dose dependent sin 16 NA
723 181.18 wind 7.0 1440 > th dose independent rect. 7 2
751 181.22 atmosphere 1000.0 1440 < th dose independent rect. 19 18
770 181.23 atmosphere 1000.0 1440 < th dose dependent no NA NA
782 181.24 atmosphere 1000.0 1440 < th dose dependent rect. 10 22
798 181.26 radiation 1.0 30 < th dose dependent rect. 3 18
806 181.27 atmosphere 1000.0 270 > th dose independent rect. 16 15
830 181.29 atmosphere 1000.0 1440 < th dose dependent rect. 3 23
831 181.29 atmosphere 1000.0 1440 < th dose dependent rect. 5 23
833 181.30 atmosphere 1000.0 1440 > th dose independent rect. 19 13
840 181.31 atmosphere 1000.0 1440 < th dose independent rect. 18 14
849 181.32 atmosphere 1000.0 1440 < th dose independent rect. 19 10
881 181.35 atmosphere 1000.0 1440 > th dose independent rect. 19 18
885 181.36 wind 5.0 720 > th dose independent rect. 15 4
889 181.36 atmosphere 1000.0 1440 > th dose independent rect. 19 11
911 181.39 radiation 10.0 14400 > th dose independent rect. 6 3
936 181.40 atmosphere 995.0 1440 > th dose independent rect. 11 17
965 181.43 wind 5.0 4320 > th dose dependent rect. 15 5
987 181.46 wind 5.0 1440 > th dose dependent rect. 7 2
988 181.46 atmosphere 995.0 43200 < th dose dependent rect. 16 6