Os02g0798200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0798200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.4 | 0.413 | 11.8 | 0.679 | 1.69 | -0.462 | 1.21 | 0.382 | 0.192 | 6.4 | 20.1 | 136 | -- | -- |
| 77.97 | 0.411 | 11.8 | 0.624 | 1.69 | -0.501 | 1.14 | -- | 0.184 | 6.4 | 20 | 143 | -- | -- |
| 80.85 | 0.419 | 11.8 | 0.684 | 1.69 | -0.508 | -- | 0.201 | 0.188 | 6.36 | 20 | 151 | -- | -- |
| 80.96 | 0.419 | 11.8 | 0.645 | 1.69 | -0.519 | -- | -- | 0.174 | 6.35 | 20.06 | 152 | -- | -- |
| 190.36 | 0.643 | 11.8 | 0.284 | -- | -0.64 | -- | -0.125 | 0.235 | -- | 26.4 | 367 | -- | -- |
| 86.76 | 0.437 | 11.8 | 0.485 | 1.73 | -- | 1.17 | -- | 0.0913 | 6.22 | -- | -- | -- | -- |
| 90.08 | 0.444 | 11.8 | 0.497 | 1.73 | -- | -- | -- | 0.0868 | 6.16 | -- | -- | -- | -- |
| 172.71 | 0.612 | 11.8 | 0.8 | -- | -1.18 | -- | -- | 0.261 | -- | 27.57 | 403 | -- | -- |
| 91.31 | 0.445 | 11.8 | -- | 1.73 | -0.381 | -- | -- | 0.115 | 6.28 | 20.2 | 133 | -- | -- |
| 245.88 | 0.733 | 11.8 | 0.545 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 96.59 | 0.46 | 11.8 | -- | 1.74 | -- | -- | -- | 0.0315 | 6.14 | -- | -- | -- | -- |
| 186.95 | 0.637 | 11.8 | -- | -- | -1.2 | -- | -- | 0.195 | -- | 28.2 | 459 | -- | -- |
| 253.72 | 0.743 | 11.8 | -- | -- | -- | -- | -- | 0.0647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.16 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 73.58 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 3 | 73.63 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 4 | 73.69 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 6 | 73.79 | wind | 7 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 8 | 73.82 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 12 | 73.93 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 15 | 73.96 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 17 | 73.99 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 18 | 74.02 | wind | 7 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 42 | 74.36 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 65 | 74.61 | temperature | 20 | 30 | > th | dose independent | rect. | 23 | 19 |
| 78 | 74.71 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 22 |
| 79 | 74.73 | wind | 3 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 94 | 74.82 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 99 | 74.85 | wind | 3 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 110 | 74.91 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 112 | 74.92 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 119 | 74.94 | wind | 3 | 43200 | < th | dose independent | sin | 9 | NA |
| 125 | 74.96 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 145 | 75.00 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 149 | 75.02 | humidity | 90 | 720 | < th | dose independent | rect. | 19 | 2 |
| 154 | 75.04 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 157 | 75.05 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 159 | 75.06 | wind | 3 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 162 | 75.07 | wind | 3 | 43200 | > th | dose independent | sin | 8 | NA |
| 213 | 75.16 | wind | 5 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 214 | 75.16 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 216 | 75.17 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 237 | 75.21 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 253 | 75.23 | wind | 3 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 277 | 75.28 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 288 | 75.29 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 310 | 75.36 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 316 | 75.37 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 329 | 75.39 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 344 | 75.42 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 353 | 75.43 | wind | 5 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 355 | 75.44 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 401 | 75.51 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 416 | 75.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 439 | 75.58 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 453 | 75.61 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 480 | 75.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 496 | 75.67 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 502 | 75.68 | wind | 5 | 43200 | < th | dose dependent | sin | 8 | NA |
| 506 | 75.69 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 546 | 75.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 560 | 75.78 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 577 | 75.80 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 644 | 75.90 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 654 | 75.90 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 6 |
| 708 | 75.95 | humidity | 80 | 720 | > th | dose independent | rect. | 14 | 12 |
| 730 | 75.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 806 | 76.05 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 15 |
| 830 | 76.07 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 837 | 76.08 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 23 |
| 838 | 76.08 | wind | 1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 839 | 76.08 | wind | 1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 850 | 76.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 873 | 76.11 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 20 |
| 887 | 76.12 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 22 |
| 910 | 76.13 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |