Os02g0797600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0797600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.65 | 0.229 | 13.5 | -0.293 | 1.1 | 0.446 | 0.493 | -0.95 | 0.00303 | 7.67 | 24.8 | 5755 | -- | -- |
| 24.01 | 0.228 | 13.5 | -0.0182 | 1.11 | 0.363 | 0.504 | -- | 0.0617 | 7.71 | 24.07 | 5679 | -- | -- |
| 24.34 | 0.23 | 13.5 | -0.265 | 1.1 | 0.44 | -- | -0.881 | 0.00302 | 7.64 | 24.57 | 5755 | -- | -- |
| 24.62 | 0.231 | 13.5 | -0.0211 | 1.1 | 0.359 | -- | -- | 0.056 | 7.68 | 23.5 | 5706 | -- | -- |
| 89.4 | 0.44 | 13.5 | -0.312 | -- | 0.493 | -- | -0.819 | 0.0731 | -- | 28.16 | 5722 | -- | -- |
| 28.84 | 0.252 | 13.5 | 0.118 | 1.11 | -- | 0.47 | -- | 0.117 | 7.61 | -- | -- | -- | -- |
| 29.46 | 0.254 | 13.5 | 0.13 | 1.11 | -- | -- | -- | 0.116 | 7.58 | -- | -- | -- | -- |
| 89.27 | 0.44 | 13.5 | 0.0403 | -- | 0.356 | -- | -- | 0.18 | -- | 29.7 | 5779 | -- | -- |
| 24.62 | 0.231 | 13.5 | -- | 1.1 | 0.364 | -- | -- | 0.0535 | 7.66 | 23.44 | 5722 | -- | -- |
| 95.76 | 0.457 | 13.5 | 0.146 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 29.9 | 0.256 | 13.5 | -- | 1.11 | -- | -- | -- | 0.102 | 7.57 | -- | -- | -- | -- |
| 88.25 | 0.438 | 13.5 | -- | -- | 0.325 | -- | -- | 0.0837 | -- | 33.72 | 7159 | -- | -- |
| 96.32 | 0.458 | 13.5 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.02 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 23.18 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 5 | 23.38 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 20 | 23.54 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 23 | 23.55 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 28 | 23.57 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 18 |
| 35 | 23.58 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 37 | 23.58 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 45 | 23.59 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 62 | 23.60 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 68 | 23.61 | wind | 5.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 70 | 23.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 72 | 23.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 81 | 23.61 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 90 | 23.62 | wind | 5.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 106 | 23.62 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 12 |
| 159 | 23.64 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 169 | 23.65 | wind | 5.0 | 43200 | > th | dose independent | no | NA | NA |
| 191 | 23.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 194 | 23.66 | wind | 5.0 | 43200 | < th | dose independent | no | NA | NA |
| 209 | 23.66 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 211 | 23.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 225 | 23.67 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 228 | 23.67 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 253 | 23.69 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 18 |
| 256 | 23.69 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 19 |
| 267 | 23.69 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 268 | 23.69 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 291 | 23.70 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 11 |
| 439 | 23.81 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 445 | 23.81 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 461 | 23.82 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 462 | 23.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 476 | 23.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 484 | 23.84 | temperature | 30.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 524 | 23.85 | temperature | 25.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 544 | 23.86 | temperature | 30.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 579 | 23.87 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 587 | 23.87 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 598 | 23.87 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 620 | 23.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 624 | 23.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 647 | 23.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 709 | 23.90 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 18 |
| 711 | 23.91 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 758 | 23.91 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 772 | 23.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 787 | 23.92 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 15 |
| 801 | 23.92 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 817 | 23.93 | temperature | 25.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 853 | 23.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 956 | 23.96 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 8 |