Os02g0795300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0795300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.04 | 0.156 | 14.7 | 0.393 | 0.621 | -0.166 | -0.251 | -0.486 | 0.0617 | 22 | 18.98 | 1271 | -- | -- |
| 11.48 | 0.158 | 14.7 | 0.433 | 0.619 | -0.186 | -0.339 | -- | 0.0712 | 22 | 18.07 | 1239 | -- | -- |
| 11.25 | 0.156 | 14.7 | 0.405 | 0.631 | -0.169 | -- | -0.518 | 0.0581 | 22 | 19.29 | 1224 | -- | -- |
| 11.86 | 0.16 | 14.7 | 0.463 | 0.633 | -0.195 | -- | -- | 0.0868 | 22 | 15.65 | 1239 | -- | -- |
| 29.33 | 0.254 | 14.7 | 0.43 | -- | -0.402 | -- | 0.296 | 0.037 | -- | 14.09 | 2397 | -- | -- |
| 12.82 | 0.168 | 14.7 | 0.419 | 0.585 | -- | -0.341 | -- | 0.0431 | 21.9 | -- | -- | -- | -- |
| 13.27 | 0.171 | 14.7 | 0.433 | 0.587 | -- | -- | -- | 0.0439 | 21.9 | -- | -- | -- | -- |
| 29.51 | 0.254 | 14.7 | 0.44 | -- | -0.407 | -- | -- | 0.0381 | -- | 14.09 | 2397 | -- | -- |
| 16.3 | 0.188 | 14.7 | -- | 0.582 | -0.302 | -- | -- | 0.0484 | 22 | 43.93 | 7005 | -- | -- |
| 33.92 | 0.272 | 14.7 | 0.439 | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
| 18.2 | 0.2 | 14.7 | -- | 0.589 | -- | -- | -- | -0.00428 | 21.9 | -- | -- | -- | -- |
| 34.61 | 0.275 | 14.7 | -- | -- | -0.406 | -- | -- | -0.0107 | -- | 14.09 | 2397 | -- | -- |
| 39.01 | 0.292 | 14.7 | -- | -- | -- | -- | -- | -0.00487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 10.88 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 5 | 10.90 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 7 | 10.90 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 9 | 10.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 10 | 10.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 19 | 10.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 20 | 10.94 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 22 | 10.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 23 | 10.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 26 | 10.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 29 | 10.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 33 | 10.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 39 | 10.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 43 | 10.97 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 48 | 10.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 49 | 10.98 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 3 |
| 79 | 11.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 87 | 11.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 114 | 11.01 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 136 | 11.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 173 | 11.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 175 | 11.05 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 183 | 11.05 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 196 | 11.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 197 | 11.05 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 221 | 11.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 231 | 11.06 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 256 | 11.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 262 | 11.07 | wind | 5.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 276 | 11.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 281 | 11.07 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 293 | 11.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 310 | 11.08 | radiation | 30.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 326 | 11.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 346 | 11.09 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 349 | 11.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 372 | 11.09 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 394 | 11.10 | wind | 3.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 395 | 11.10 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 420 | 11.10 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 8 |
| 459 | 11.11 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 465 | 11.11 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 502 | 11.11 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 12 | 15 |
| 508 | 11.12 | wind | 3.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 510 | 11.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 511 | 11.12 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 514 | 11.12 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 518 | 11.12 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 561 | 11.12 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 582 | 11.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 583 | 11.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 584 | 11.13 | wind | 1.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 619 | 11.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 626 | 11.14 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 631 | 11.14 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 632 | 11.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 636 | 11.14 | humidity | 70.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 645 | 11.14 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 663 | 11.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 683 | 11.14 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 688 | 11.15 | radiation | 40.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 690 | 11.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 692 | 11.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 702 | 11.15 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 715 | 11.15 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 763 | 11.15 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 797 | 11.16 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 810 | 11.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 823 | 11.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 824 | 11.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 825 | 11.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 838 | 11.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 841 | 11.16 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 873 | 11.16 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 889 | 11.17 | radiation | 20.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 891 | 11.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 892 | 11.17 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 895 | 11.17 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 896 | 11.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 925 | 11.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 929 | 11.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 934 | 11.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 935 | 11.17 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 961 | 11.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 964 | 11.17 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 9 |
| 995 | 11.18 | radiation | 40.0 | 1440 | > th | dose independent | sin | 13 | NA |