Os02g0794600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Copper chaperone COX17-1.
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Os02g0794600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Copper chaperone COX17-1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135 | 0.546 | 9.35 | -1.91 | 0.656 | 1.54 | 0.681 | -1.72 | -0.844 | 12.1 | 24.7 | 19 | -- | -- |
| 136.07 | 0.547 | 9.33 | -1.69 | 0.665 | 1.39 | 0.488 | -- | -0.778 | 12.3 | 24.7 | 19 | -- | -- |
| 136.77 | 0.545 | 9.34 | -1.82 | 0.636 | 1.53 | -- | -0.989 | -0.82 | 12.1 | 24.7 | 14 | -- | -- |
| 137.06 | 0.549 | 9.33 | -1.68 | 0.653 | 1.41 | -- | -- | -0.783 | 12.3 | 24.6 | 13 | -- | -- |
| 155.71 | 0.581 | 9.37 | -1.96 | -- | 2.05 | -- | -1.6 | -0.899 | -- | 24.58 | 2 | -- | -- |
| 165.43 | 0.603 | 9.3 | -1.49 | 1.15 | -- | 0.799 | -- | -0.649 | 13.4 | -- | -- | -- | -- |
| 168.01 | 0.607 | 9.3 | -1.46 | 1.15 | -- | -- | -- | -0.645 | 13.4 | -- | -- | -- | -- |
| 156.99 | 0.584 | 9.35 | -1.77 | -- | 1.93 | -- | -- | -0.851 | -- | 24.5 | 2 | -- | -- |
| 207.98 | 0.675 | 9.27 | -- | 0.836 | 1.04 | -- | -- | -0.521 | 12.9 | 25.6 | 3 | -- | -- |
| 248.79 | 0.737 | 9.31 | -1.5 | -- | -- | -- | -- | -0.669 | -- | -- | -- | -- | -- |
| 224.13 | 0.7 | 9.26 | -- | 1.17 | -- | -- | -- | -0.482 | 13.5 | -- | -- | -- | -- |
| 238.09 | 0.719 | 9.3 | -- | -- | 1.68 | -- | -- | -0.627 | -- | 24.6 | 2 | -- | -- |
| 308.51 | 0.82 | 9.27 | -- | -- | -- | -- | -- | -0.502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.85 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 2 | 132.68 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 4 | 132.74 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 5 | 132.76 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 7 | 133.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 11 | 133.27 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 30 | 134.15 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 31 | 134.16 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 32 | 134.18 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 34 | 134.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 20 |
| 38 | 134.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 40 | 134.53 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 41 | 134.62 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 66 | 135.04 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 67 | 135.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 82 | 135.29 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 21 |
| 83 | 135.29 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 114 | 135.48 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 115 | 135.48 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 145 | 135.78 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 146 | 135.78 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 152 | 135.83 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 168 | 135.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 171 | 135.84 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 178 | 135.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 188 | 135.96 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 191 | 135.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 10 |
| 193 | 135.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 10 |
| 211 | 136.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 223 | 136.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 228 | 136.23 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 231 | 136.27 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 241 | 136.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 259 | 136.52 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 261 | 136.53 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 262 | 136.53 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 273 | 136.59 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 295 | 136.64 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 302 | 136.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 303 | 136.68 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 313 | 136.77 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 315 | 136.77 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 321 | 136.80 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 322 | 136.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 325 | 136.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 326 | 136.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 327 | 136.83 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 10 |
| 329 | 136.85 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 333 | 136.85 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 339 | 136.91 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 351 | 137.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 359 | 137.07 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 409 | 137.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 411 | 137.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 416 | 137.31 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 428 | 137.35 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 430 | 137.37 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 433 | 137.38 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 437 | 137.40 | humidity | 60.0 | 10 | > th | dose dependent | no | NA | NA |
| 446 | 137.46 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 451 | 137.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 459 | 137.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 467 | 137.53 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 470 | 137.55 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 10 |
| 492 | 137.60 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 499 | 137.61 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 500 | 137.61 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 502 | 137.61 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 10 |
| 513 | 137.64 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 18 |
| 518 | 137.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 523 | 137.66 | temperature | 25.0 | 30 | > th | dose dependent | sin | 1 | NA |
| 562 | 137.77 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 567 | 137.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 607 | 137.89 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 608 | 137.89 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 609 | 137.89 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 627 | 137.96 | humidity | 60.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 667 | 138.05 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 759 | 138.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 15 |
| 772 | 138.25 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 22 |
| 859 | 138.41 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 6 | 14 |
| 876 | 138.45 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 889 | 138.48 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 13 | 3 |
| 901 | 138.51 | humidity | 70.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 931 | 138.55 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 953 | 138.59 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 964 | 138.62 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 965 | 138.62 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 973 | 138.63 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 7 |