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Os02g0794000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0204) R2 : 0.0307
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.0428) R2dN8 : 0.0396 R2N8 : 0.0307
σ : 0.383
deviance : 67.42
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.32 0.283 9.23 1.04 0.561 -0.469 -0.391 3.43 0.486 4.36 20.47 1680 -- --
42.07 0.302 9.3 0.457 0.553 -0.745 -0.385 -- 0.439 4.44 14.64 16160 -- --
36.72 0.282 9.23 1.04 0.556 -0.472 -- 3.45 0.487 4.4 20.49 1715 -- --
41.84 0.301 9.3 0.452 0.586 -0.705 -- -- 0.43 4.47 9.765 14853 -- --
51.6 0.336 9.29 0.559 -- -0.757 -- 3.1 0.392 -- 22.06 1800 -- --
48.68 0.327 9.37 -0.0681 0.586 -- -0.433 -- 0.14 4.48 -- -- -- --
49.18 0.328 9.36 -0.0647 0.584 -- -- -- 0.143 4.56 -- -- -- --
59.61 0.361 9.35 0.0612 -- -0.56 -- -- 0.243 -- 22.06 1800 -- --
43.88 0.309 9.34 -- 0.597 -0.457 -- -- 0.264 4.47 9.746 10628 -- --
67.38 0.384 9.37 -0.0421 -- -- -- -- 0.158 -- -- -- -- --
49.29 0.328 9.36 -- 0.583 -- -- -- 0.15 4.56 -- -- -- --
59.71 0.361 9.35 -- -- -0.548 -- -- 0.235 -- 22.06 1800 -- --
67.42 0.383 9.37 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.77 wind 7 14400 > th dose dependent rect. 10 1
2 32.90 wind 9 14400 < th dose independent rect. 6 5
3 32.99 humidity 80 14400 > th dose independent rect. 13 1
5 33.18 wind 3 43200 < th dose dependent rect. 11 1
9 33.30 wind 9 14400 > th dose independent rect. 7 4
12 33.32 humidity 80 14400 < th dose independent rect. 13 2
16 33.44 wind 3 43200 < th dose independent rect. 11 2
17 33.46 wind 3 43200 > th dose independent rect. 12 1
18 33.47 wind 9 14400 > th dose independent rect. 9 2
29 33.57 wind 9 14400 < th dose independent rect. 10 1
31 33.58 wind 3 43200 < th dose dependent rect. 21 8
32 33.59 humidity 80 43200 > th dose independent rect. 4 1
35 33.60 wind 3 43200 < th dose dependent rect. 20 17
56 33.80 humidity 80 43200 < th dose independent rect. 4 1
60 33.85 wind 3 43200 < th dose dependent rect. 23 5
73 33.97 wind 3 43200 < th dose dependent rect. 8 5
97 34.12 wind 3 43200 < th dose dependent rect. 6 7
118 34.20 wind 1 43200 < th dose independent rect. 23 3
128 34.26 humidity 90 14400 > th dose dependent rect. 15 13
143 34.36 wind 3 43200 < th dose independent rect. 6 1
149 34.37 wind 1 43200 > th dose independent rect. 24 2
157 34.38 radiation 1 14400 < th dose dependent rect. 19 10
160 34.39 wind 3 43200 > th dose independent rect. 6 1
163 34.40 humidity 90 14400 > th dose independent rect. 15 13
168 34.43 atmosphere 1005 43200 < th dose independent rect. 11 1
175 34.45 humidity 90 14400 > th dose independent rect. 19 15
180 34.46 humidity 80 43200 < th dose dependent rect. 23 2
182 34.47 wind 3 43200 < th dose independent rect. 6 8
183 34.47 humidity 90 14400 > th dose independent rect. 16 18
185 34.47 humidity 80 43200 < th dose dependent rect. 22 4
192 34.48 wind 7 14400 > th dose dependent rect. 5 8
195 34.49 atmosphere 1005 14400 > th dose independent rect. 16 1
241 34.55 humidity 90 14400 > th dose dependent rect. 15 19
242 34.55 humidity 90 14400 > th dose dependent rect. 1 21
246 34.56 wind 3 43200 < th dose dependent sin 9 NA
251 34.57 humidity 90 14400 > th dose independent rect. 19 6
256 34.57 humidity 90 14400 > th dose dependent rect. 2 19
257 34.57 humidity 90 14400 > th dose dependent rect. 7 22
270 34.60 humidity 90 14400 > th dose independent sin 14 NA
312 34.65 humidity 90 14400 > th dose dependent sin 14 NA
328 34.67 humidity 80 14400 > th dose independent rect. 10 1
336 34.68 wind 3 43200 < th dose independent rect. 1 15
344 34.69 humidity 70 14400 > th dose dependent rect. 14 1
347 34.70 atmosphere 1005 14400 < th dose independent rect. 16 1
350 34.70 wind 7 14400 > th dose dependent rect. 9 4
370 34.72 wind 3 43200 < th dose independent rect. 3 13
394 34.75 humidity 80 14400 > th dose dependent rect. 12 3
418 34.79 wind 3 43200 < th dose independent rect. 8 6
444 34.81 wind 3 43200 > th dose independent rect. 5 10
450 34.81 wind 7 14400 > th dose dependent rect. 23 15
468 34.83 wind 3 43200 < th dose independent rect. 20 20
472 34.84 wind 3 43200 < th dose independent sin 3 NA
474 34.84 atmosphere 1005 43200 > th dose independent rect. 11 1
483 34.84 humidity 80 43200 < th dose dependent rect. 3 2
485 34.84 temperature 20 1440 > th dose dependent rect. 17 6
497 34.85 wind 3 43200 > th dose independent rect. 1 15
507 34.86 humidity 90 14400 > th dose independent rect. 2 23
509 34.86 humidity 90 14400 > th dose dependent no NA NA
528 34.87 humidity 90 14400 > th dose dependent rect. 18 23
532 34.88 humidity 90 14400 > th dose independent rect. 7 21
590 34.92 humidity 80 43200 < th dose independent rect. 20 11
637 34.96 humidity 80 14400 > th dose dependent rect. 10 5
706 35.03 humidity 90 14400 > th dose independent no NA NA
723 35.04 humidity 90 14400 > th dose independent rect. 9 23
734 35.05 humidity 90 14400 > th dose independent rect. 23 23
739 35.06 wind 3 43200 > th dose independent sin 2 NA
740 35.06 wind 7 14400 > th dose independent rect. 5 8
772 35.09 radiation 1 14400 > th dose independent rect. 18 1
822 35.14 wind 9 14400 < th dose independent rect. 22 16
850 35.17 wind 3 43200 > th dose independent rect. 20 20
865 35.18 wind 1 43200 < th dose dependent rect. 8 20
877 35.19 wind 1 14400 > th dose dependent rect. 5 8
912 35.23 wind 1 14400 > th dose dependent rect. 4 10
916 35.24 wind 3 43200 < th dose independent rect. 20 1
948 35.27 wind 7 14400 < th dose independent rect. 5 8
953 35.27 wind 1 43200 > th dose dependent rect. 12 1
990 35.31 temperature 20 1440 > th dose dependent sin 14 NA