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Os02g0793900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0149) R2 : 0.00432
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0441 (0.0314) R2dN8 : 0.00558 R2N8 : 0.00432
σ : 0.281
deviance : 36.13
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.19 0.249 12.6 -0.222 0.244 -0.1 0.152 1.17 0.0104 5.2 60 9 -- --
30.61 0.26 12.6 -0.171 0.263 -0.18 0.974 -- 0.021 3.57 50.53 15 -- --
28.21 0.249 12.6 -0.223 0.238 -0.0876 -- 1.22 0.00999 5.38 60 9 -- --
32.78 0.268 12.6 -0.187 0.241 -0.066 -- -- 0.0176 5.49 50.53 15 -- --
30.33 0.258 12.6 -0.218 -- 0.0419 -- 1.24 0.0207 -- 59.7 18 -- --
31.16 0.262 12.6 -0.169 0.146 -- 0.942 -- 0.0256 3.29 -- -- -- --
32.85 0.268 12.6 -0.187 0.216 -- -- -- 0.0192 6 -- -- -- --
33.93 0.271 12.6 -0.162 -- 0.201 -- -- 0.045 -- 62.2 480 -- --
33.71 0.272 12.6 -- 0.238 -0.0661 -- -- 0.0384 5.53 50.53 15 -- --
35.27 0.278 12.6 -0.181 -- -- -- -- 0.0241 -- -- -- -- --
33.77 0.272 12.6 -- 0.213 -- -- -- 0.04 6.05 -- -- -- --
34.76 0.275 12.6 -- -- 0.198 -- -- 0.0571 -- 65.37 480 -- --
36.13 0.281 12.6 -- -- -- -- -- 0.0441 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.52 temperature 20.0 270 > th dose dependent rect. 23 8
19 26.16 temperature 25.0 10 > th dose independent rect. 1 8
29 26.39 temperature 20.0 270 > th dose independent rect. 3 13
31 26.42 temperature 15.0 1440 > th dose independent rect. 9 15
44 26.58 temperature 15.0 1440 > th dose independent sin 22 NA
48 26.60 humidity 90.0 10 < th dose independent rect. 4 12
50 26.60 temperature 20.0 720 > th dose dependent rect. 23 1
59 26.71 humidity 90.0 10 < th dose independent rect. 4 14
67 26.76 atmosphere 1015.0 720 < th dose independent rect. 1 15
73 26.80 humidity 90.0 10 < th dose independent rect. 6 10
78 26.83 humidity 90.0 10 < th dose independent rect. 4 16
83 26.86 humidity 90.0 10 < th dose independent rect. 6 12
89 26.89 atmosphere 1015.0 720 < th dose independent rect. 23 7
92 26.90 atmosphere 1015.0 720 < th dose independent sin 4 NA
95 26.91 humidity 90.0 10 < th dose independent rect. 6 14
97 26.91 temperature 20.0 720 > th dose dependent rect. 21 5
100 26.92 atmosphere 1015.0 720 < th dose independent rect. 13 18
111 26.97 wind 9.0 10 < th dose independent sin 7 NA
113 26.97 temperature 15.0 720 > th dose independent rect. 4 9
116 26.97 humidity 50.0 10 > th dose dependent rect. 7 23
118 26.98 temperature 15.0 90 > th dose independent sin 1 NA
119 26.98 temperature 15.0 720 > th dose independent sin 6 NA
121 26.99 temperature 20.0 270 > th dose independent sin 4 NA
122 26.99 temperature 25.0 10 > th dose independent sin 5 NA
125 26.99 atmosphere 1015.0 720 < th dose independent rect. 23 17
133 27.02 atmosphere 1015.0 720 < th dose independent rect. 19 10
134 27.02 atmosphere 1015.0 720 < th dose independent rect. 17 14
146 27.05 atmosphere 1015.0 720 < th dose independent rect. 2 18
150 27.06 atmosphere 1015.0 720 < th dose independent rect. 19 21
152 27.07 humidity 90.0 10 < th dose independent sin 23 NA
154 27.07 temperature 20.0 270 > th dose independent rect. 2 5
170 27.10 wind 9.0 90 < th dose independent sin 8 NA
171 27.10 radiation 1.0 720 > th dose independent rect. 5 9
182 27.12 radiation 1.0 720 > th dose independent rect. 18 20
184 27.12 humidity 60.0 30 > th dose dependent rect. 7 21
214 27.16 atmosphere 1015.0 720 < th dose independent rect. 17 23
225 27.19 temperature 15.0 720 > th dose independent rect. 4 7
251 27.24 atmosphere 1015.0 720 < th dose independent rect. 15 16
254 27.24 temperature 15.0 10 > th dose dependent rect. 2 14
256 27.25 atmosphere 1015.0 720 < th dose independent rect. 1 4
261 27.25 atmosphere 1005.0 270 > th dose dependent rect. 23 8
294 27.30 humidity 90.0 270 < th dose independent rect. 6 10
318 27.33 temperature 15.0 10 > th dose dependent rect. 4 12
369 27.40 precipitation 0.1 270 < th dose independent sin 23 NA
374 27.40 temperature 25.0 10 > th dose independent rect. 1 15
375 27.40 temperature 15.0 10 > th dose dependent sin 5 NA
377 27.40 precipitation 0.1 270 < th dose dependent sin 23 NA
405 27.42 atmosphere 1015.0 720 < th dose independent rect. 1 8
411 27.42 radiation 1.0 720 < th dose dependent rect. 21 18
418 27.43 humidity 70.0 10 > th dose independent rect. 9 19
420 27.43 radiation 1.0 720 < th dose dependent rect. 21 16
421 27.43 humidity 60.0 10 > th dose dependent rect. 9 19
454 27.47 temperature 20.0 270 > th dose independent rect. 4 1
457 27.47 temperature 25.0 10 > th dose independent rect. 3 13
467 27.48 wind 7.0 10 < th dose independent rect. 6 12
478 27.49 wind 9.0 30 < th dose dependent rect. 6 12
491 27.51 humidity 90.0 270 < th dose independent sin 0 NA
496 27.51 atmosphere 1015.0 720 < th dose independent rect. 15 23
511 27.52 radiation 1.0 720 < th dose independent rect. 21 18
520 27.52 wind 1.0 90 > th dose dependent rect. 7 16
525 27.53 atmosphere 1015.0 720 < th dose independent rect. 21 19
527 27.53 temperature 25.0 90 < th dose dependent rect. 24 11
559 27.56 radiation 1.0 720 < th dose independent rect. 21 16
569 27.57 temperature 15.0 720 > th dose independent rect. 8 6
579 27.58 wind 5.0 10 < th dose independent rect. 23 19
590 27.59 atmosphere 1015.0 720 < th dose independent rect. 23 22
605 27.61 wind 7.0 10 < th dose independent rect. 4 12
607 27.61 wind 7.0 10 < th dose independent rect. 4 14
627 27.62 humidity 60.0 30 > th dose dependent rect. 9 17
630 27.63 atmosphere 1015.0 720 < th dose independent sin 12 NA
631 27.63 atmosphere 1015.0 720 < th dose independent rect. 2 1
655 27.64 wind 1.0 90 > th dose dependent rect. 7 20
708 27.68 humidity 70.0 10 > th dose independent rect. 9 21
728 27.69 wind 7.0 10 < th dose dependent rect. 23 19
729 27.69 humidity 90.0 270 > th dose dependent rect. 6 20
738 27.70 atmosphere 1015.0 720 < th dose independent rect. 21 17
743 27.70 humidity 60.0 10 > th dose dependent rect. 5 23
795 27.73 wind 7.0 10 < th dose independent sin 23 NA
797 27.73 temperature 15.0 4320 > th dose independent rect. 7 1
819 27.74 temperature 25.0 30 < th dose dependent sin 6 NA
834 27.75 wind 7.0 10 < th dose independent rect. 2 14
880 27.77 wind 9.0 10 < th dose dependent rect. 23 23
912 27.79 wind 5.0 10 < th dose independent rect. 2 16
926 27.80 radiation 1.0 720 > th dose independent sin 4 NA
952 27.80 radiation 40.0 30 < th dose dependent rect. 7 21