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Os02g0789600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DEM2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0186) R2 : 0.0244
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.132 (0.0391) R2dN8 : 0.0315 R2N8 : 0.0244
σ : 0.35
deviance : 56.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.46 0.28 11 0.437 0.275 0.258 -0.694 -1.36 0.0726 12.7 10 1317 -- --
38.11 0.288 11 0.628 0.272 0.204 -0.422 -- 0.143 12.6 10.2 1315 -- --
37.33 0.285 11 0.448 0.271 0.257 -- -1.05 0.081 12.5 10.01 1318 -- --
38.99 0.291 11 0.619 0.28 0.231 -- -- 0.134 12.5 10.22 1314 -- --
37.16 0.284 11 0.364 -- 0.39 -- -1.2 0.0508 -- 2.184 1605 -- --
39.38 0.294 11 0.702 0.241 -- -0.522 -- 0.214 13.1 -- -- -- --
40.51 0.298 11 0.683 0.241 -- -- -- 0.211 12.8 -- -- -- --
39.7 0.295 11 0.67 -- 0.199 -- -- 0.204 -- 0.89 1623 -- --
49 0.326 11 -- 0.3 0.279 -- -- 0.13 12.8 10.03 1377 -- --
44.15 0.31 11 0.675 -- -- -- -- 0.207 -- -- -- -- --
52.82 0.34 11 -- 0.231 -- -- -- 0.135 12.7 -- -- -- --
45.99 0.316 11 -- -- 0.859 -- -- 0.075 -- 0.03343 1579 -- --
56.15 0.35 11 -- -- -- -- -- 0.132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.31 humidity 80 4320 > th dose independent rect. 22 2
2 33.68 humidity 80 4320 < th dose independent rect. 22 1
8 34.50 humidity 80 1440 < th dose independent rect. 24 13
11 34.55 humidity 80 1440 < th dose independent rect. 3 10
21 34.70 wind 7 4320 < th dose independent rect. 15 3
33 34.76 wind 7 4320 < th dose independent rect. 14 5
38 34.77 wind 7 4320 < th dose independent rect. 14 7
41 34.79 wind 7 4320 < th dose independent rect. 15 1
44 34.85 wind 7 4320 > th dose independent rect. 14 7
46 34.87 wind 7 4320 > th dose independent rect. 14 5
48 34.90 wind 7 4320 > th dose independent rect. 15 3
51 34.92 wind 7 4320 > th dose independent rect. 15 1
52 34.92 humidity 80 1440 > th dose independent rect. 3 10
57 34.95 wind 5 4320 > th dose dependent rect. 14 7
62 34.96 humidity 80 1440 > th dose independent rect. 24 13
72 34.99 wind 5 4320 > th dose dependent rect. 15 1
77 35.02 wind 5 4320 > th dose independent rect. 17 4
86 35.07 temperature 10 30 > th dose dependent rect. 15 10
87 35.08 wind 5 4320 < th dose independent rect. 17 4
93 35.12 humidity 90 10 < th dose dependent rect. 15 21
94 35.13 humidity 90 4320 > th dose independent rect. 6 1
108 35.20 humidity 80 1440 < th dose independent sin 5 NA
111 35.22 humidity 90 4320 < th dose independent rect. 6 1
119 35.25 wind 7 4320 < th dose independent rect. 17 1
120 35.25 radiation 1 1440 < th dose independent rect. 9 3
124 35.25 radiation 1 1440 < th dose dependent rect. 9 3
136 35.28 wind 5 4320 > th dose dependent rect. 13 12
150 35.33 radiation 1 720 < th dose independent rect. 8 20
152 35.33 wind 5 4320 > th dose dependent rect. 17 4
159 35.35 temperature 20 10 > th dose dependent rect. 15 18
163 35.37 humidity 90 4320 < th dose dependent rect. 23 1
166 35.38 wind 7 4320 < th dose independent rect. 14 11
180 35.40 wind 5 4320 > th dose dependent rect. 13 17
188 35.42 radiation 10 1440 > th dose independent rect. 15 21
196 35.44 wind 7 4320 > th dose independent rect. 14 11
205 35.46 wind 7 4320 > th dose independent rect. 17 1
209 35.46 wind 1 30 > th dose independent rect. 15 10
216 35.47 humidity 60 30 > th dose independent rect. 12 16
217 35.47 radiation 1 720 > th dose independent rect. 13 17
222 35.48 wind 7 4320 < th dose independent rect. 13 18
223 35.48 wind 3 4320 > th dose dependent rect. 19 2
231 35.49 wind 5 4320 > th dose dependent rect. 17 2
239 35.51 radiation 1 1440 > th dose independent rect. 8 5
245 35.51 radiation 30 1440 < th dose independent rect. 16 16
247 35.51 wind 7 4320 > th dose independent rect. 13 18
274 35.55 humidity 80 1440 > th dose independent sin 4 NA
289 35.56 wind 5 4320 > th dose independent rect. 16 9
321 35.59 radiation 1 720 < th dose dependent rect. 8 20
323 35.60 radiation 10 1440 > th dose independent rect. 6 7
327 35.60 wind 5 4320 < th dose independent rect. 16 9
336 35.60 radiation 1 720 < th dose independent rect. 13 15
354 35.61 temperature 25 270 > th dose dependent rect. 10 1
362 35.62 temperature 25 90 > th dose independent rect. 15 18
375 35.64 wind 5 4320 > th dose independent sin 15 NA
376 35.64 radiation 10 1440 > th dose independent sin 5 NA
413 35.66 temperature 10 10 > th dose dependent rect. 15 21
414 35.67 radiation 1 1440 > th dose independent rect. 9 1
456 35.71 wind 5 4320 < th dose independent sin 15 NA
473 35.72 radiation 1 90 > th dose independent rect. 13 23
476 35.73 radiation 1 1440 > th dose independent rect. 11 1
510 35.76 wind 5 4320 > th dose dependent sin 16 NA
526 35.77 humidity 60 270 > th dose independent rect. 9 19
535 35.78 radiation 1 720 < th dose independent rect. 8 13
601 35.82 humidity 50 10 > th dose dependent rect. 19 23
612 35.83 radiation 10 1440 > th dose independent rect. 6 11
635 35.84 humidity 50 10 > th dose independent rect. 1 14
663 35.86 radiation 1 720 < th dose dependent rect. 13 15
694 35.88 humidity 90 30 < th dose independent rect. 15 21
695 35.88 radiation 10 1440 > th dose independent rect. 11 23
697 35.88 radiation 10 1440 < th dose dependent rect. 8 9
714 35.89 radiation 1 720 < th dose independent rect. 1 18
729 35.90 radiation 1 90 < th dose independent rect. 19 23
741 35.91 radiation 1 720 < th dose independent rect. 1 20
748 35.91 humidity 50 30 > th dose dependent rect. 1 23
749 35.91 radiation 10 90 < th dose dependent rect. 19 23
752 35.92 radiation 1 720 > th dose independent rect. 13 6
770 35.92 radiation 1 30 > th dose independent rect. 15 21
831 35.95 radiation 1 270 < th dose independent rect. 5 23
835 35.95 radiation 1 720 < th dose dependent rect. 8 13
836 35.95 radiation 1 270 < th dose dependent rect. 5 23
849 35.97 radiation 1 1440 < th dose independent rect. 13 1
859 35.97 radiation 1 1440 < th dose dependent rect. 13 1
867 35.98 radiation 10 1440 > th dose independent no NA NA
956 35.98 humidity 50 30 > th dose dependent rect. 1 14
988 36.00 wind 9 4320 < th dose dependent rect. 20 1