Os02g0788500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0788500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.39 | 0.52 | 11.4 | -0.663 | 2.16 | 1.97 | -0.439 | 1.05 | -0.746 | 19.8 | 23.79 | 157 | 0.0104 | -- |
| 122.58 | 0.516 | 11.4 | -0.735 | 2.16 | 2.07 | -0.52 | -- | -0.775 | 19.8 | 23.79 | 181 | 0.256 | -- |
| 122.63 | 0.516 | 11.4 | -0.633 | 2.16 | 1.98 | -- | 1.25 | -0.744 | 19.8 | 23.69 | 175 | 0.0797 | -- |
| 123.31 | 0.517 | 11.5 | -0.764 | 2.16 | 2.06 | -- | -- | -0.793 | 19.8 | 23.76 | 181 | 0.294 | -- |
| 260.23 | 0.751 | 11.4 | -1.28 | -- | 1.98 | -- | -2.12 | -0.871 | -- | 24.85 | 866 | 0.601 | -- |
| 183.28 | 0.635 | 11.4 | -0.509 | 1.87 | -- | -0.308 | -- | -0.524 | 18.7 | -- | -- | -- | -- |
| 183.51 | 0.634 | 11.4 | -0.504 | 1.87 | -- | -- | -- | -0.524 | 18.7 | -- | -- | -- | -- |
| 260.82 | 0.752 | 11.4 | -0.966 | -- | 1.78 | -- | -- | -0.806 | -- | 24.5 | 849 | 1.4e-06 | -- |
| 138.18 | 0.547 | 11.4 | -- | 2.14 | 1.92 | -- | -- | -0.696 | 19.6 | 23.94 | 181 | 0.457 | -- |
| 366.02 | 0.894 | 11.3 | -0.547 | -- | -- | -- | -- | -0.562 | -- | -- | -- | -- | -- |
| 190.2 | 0.645 | 11.4 | -- | 1.88 | -- | -- | -- | -0.468 | 18.7 | -- | -- | -- | -- |
| 283.94 | 0.785 | 11.4 | -- | -- | 1.59 | -- | -- | -0.676 | -- | 24.71 | 842 | 6.01e-07 | -- |
| 373.91 | 0.903 | 11.3 | -- | -- | -- | -- | -- | -0.501 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 2 | 117.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 12 | 120.07 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 13 | 120.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 70 | 126.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 75 | 126.64 | temperature | 25 | 90 | > th | dose dependent | sin | 5 | NA |
| 81 | 126.91 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 85 | 127.02 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 91 | 127.25 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 100 | 127.49 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 116 | 128.09 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 141 | 128.79 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 7 |
| 294 | 131.98 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 299 | 132.09 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 17 |
| 324 | 132.46 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 16 |
| 340 | 132.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 347 | 132.67 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 19 |
| 381 | 133.07 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 3 |
| 409 | 133.48 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 9 |
| 442 | 133.80 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 11 |
| 476 | 134.17 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 504 | 134.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 597 | 135.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 598 | 135.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 680 | 136.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 8 |
| 838 | 138.03 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 848 | 138.11 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 863 | 138.22 | wind | 7 | 270 | < th | dose independent | rect. | 6 | 21 |