Os02g0786000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os02g0786000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.21 | 0.262 | 8.9 | -0.201 | 0.717 | -0.418 | -0.482 | -0.801 | 0.303 | 5.64 | 0.8547 | 4770 | -- | -- |
| 31.11 | 0.26 | 8.91 | -0.163 | 0.728 | -0.45 | -0.494 | -- | 0.319 | 5.6 | 1.113 | 5885 | -- | -- |
| 31.45 | 0.261 | 8.9 | -0.191 | 0.716 | -0.408 | -- | -0.548 | 0.313 | 5.61 | 0.9235 | 5979 | -- | -- |
| 31.71 | 0.262 | 8.91 | -0.162 | 0.725 | -0.446 | -- | -- | 0.32 | 5.6 | 1.056 | 5885 | -- | -- |
| 58.06 | 0.355 | 8.91 | -0.165 | -- | -0.395 | -- | -0.608 | 0.328 | -- | 1 | 5559 | -- | -- |
| 35.68 | 0.28 | 8.92 | -0.0664 | 0.72 | -- | -0.413 | -- | 0.26 | 5.63 | -- | -- | -- | -- |
| 36.1 | 0.281 | 8.92 | -0.0685 | 0.717 | -- | -- | -- | 0.261 | 5.63 | -- | -- | -- | -- |
| 58.48 | 0.356 | 8.92 | -0.197 | -- | -0.519 | -- | -- | 0.317 | -- | 1.437 | 2582 | -- | -- |
| 32.36 | 0.265 | 8.91 | -- | 0.721 | -0.426 | -- | -- | 0.337 | 5.62 | 1 | 5979 | -- | -- |
| 62.83 | 0.37 | 8.93 | -0.0454 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 36.23 | 0.282 | 8.92 | -- | 0.716 | -- | -- | -- | 0.269 | 5.63 | -- | -- | -- | -- |
| 59.14 | 0.358 | 8.92 | -- | -- | -0.425 | -- | -- | 0.346 | -- | 1 | 5570 | -- | -- |
| 62.88 | 0.37 | 8.93 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.31 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 4 | 30.49 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 5 | 30.49 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 6 | 30.49 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 10 | 30.57 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 13 | 30.60 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 15 | 30.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 18 | 30.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 20 | 30.63 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 28 | 30.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 32 | 30.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 19 |
| 57 | 30.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 137 | 30.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 157 | 30.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 169 | 30.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 175 | 30.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 178 | 30.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 179 | 30.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 199 | 30.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 257 | 30.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 280 | 30.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 287 | 30.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 291 | 30.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 363 | 31.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 380 | 31.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 406 | 31.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 409 | 31.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 421 | 31.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 423 | 31.02 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 424 | 31.02 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 427 | 31.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 11 |
| 439 | 31.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 441 | 31.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 442 | 31.02 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 444 | 31.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 454 | 31.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 457 | 31.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 471 | 31.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 476 | 31.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 493 | 31.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 504 | 31.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 505 | 31.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 518 | 31.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 520 | 31.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 522 | 31.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 523 | 31.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 528 | 31.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 534 | 31.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 550 | 31.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 551 | 31.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 561 | 31.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 581 | 31.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 614 | 31.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 625 | 31.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 686 | 31.12 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 693 | 31.12 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 703 | 31.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 724 | 31.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 789 | 31.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 808 | 31.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 813 | 31.18 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 815 | 31.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 819 | 31.18 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 881 | 31.21 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 15 | NA |
| 884 | 31.21 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 15 | NA |
| 892 | 31.21 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 15 | NA |
| 928 | 31.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 12 |
| 950 | 31.23 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 989 | 31.24 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 996 | 31.24 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |