Os02g0780700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os02g0780700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.6 | 0.398 | 9.29 | -0.159 | 0.198 | 1.33 | 1.03 | 0.277 | -0.14 | 12.8 | 27 | 11 | -- | -- |
| 71.64 | 0.394 | 9.29 | -0.107 | 0.187 | 1.31 | 0.934 | -- | -0.127 | 12.9 | 27 | 26 | -- | -- |
| 74.4 | 0.405 | 9.27 | 0.00312 | 0.184 | 1.25 | -- | -0.585 | -0.115 | 11.5 | 26.95 | 7 | -- | -- |
| 74.98 | 0.406 | 9.28 | -0.094 | 0.183 | 1.27 | -- | -- | -0.136 | 11.4 | 26.7 | 6 | -- | -- |
| 75.78 | 0.405 | 9.28 | 0.0108 | -- | 1.16 | -- | -0.635 | -0.134 | -- | 26.83 | 58 | -- | -- |
| 96.3 | 0.46 | 9.35 | -0.415 | 0.221 | -- | -0.902 | -- | -0.42 | 2.68 | -- | -- | -- | -- |
| 98.93 | 0.466 | 9.35 | -0.393 | 0.233 | -- | -- | -- | -0.416 | 3.73 | -- | -- | -- | -- |
| 76.36 | 0.407 | 9.29 | -0.112 | -- | 1.18 | -- | -- | -0.157 | -- | 26.54 | 60 | -- | -- |
| 75.2 | 0.406 | 9.28 | -- | 0.192 | 1.31 | -- | -- | -0.118 | 11.6 | 26.7 | 7 | -- | -- |
| 101.94 | 0.472 | 9.35 | -0.383 | -- | -- | -- | -- | -0.409 | -- | -- | -- | -- | -- |
| 102.99 | 0.475 | 9.34 | -- | 0.226 | -- | -- | -- | -0.372 | 3.75 | -- | -- | -- | -- |
| 76.63 | 0.408 | 9.29 | -- | -- | 1.22 | -- | -- | -0.137 | -- | 26.49 | 59 | -- | -- |
| 105.81 | 0.48 | 9.34 | -- | -- | -- | -- | -- | -0.367 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 2 | 63.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 3 | 63.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 12 | 64.62 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 18 | 65.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 94 | 69.28 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 17 |
| 111 | 69.92 | temperature | 25.0 | 720 | < th | dose independent | rect. | 9 | 14 |
| 114 | 69.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 11 |
| 120 | 70.10 | temperature | 25.0 | 720 | > th | dose independent | sin | 20 | NA |
| 130 | 70.20 | temperature | 30.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 131 | 70.21 | temperature | 25.0 | 720 | < th | dose independent | sin | 20 | NA |
| 143 | 70.38 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 144 | 70.38 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 225 | 71.08 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 239 | 71.21 | temperature | 20.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 269 | 71.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 379 | 72.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 401 | 72.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 414 | 72.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 421 | 72.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 422 | 72.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 452 | 72.54 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 461 | 72.56 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 469 | 72.60 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 497 | 72.72 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 509 | 72.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 528 | 72.83 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 559 | 72.91 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 563 | 72.92 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 572 | 72.94 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 581 | 72.97 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 587 | 72.99 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 598 | 73.02 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 671 | 73.16 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 679 | 73.18 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 680 | 73.18 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 684 | 73.19 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 685 | 73.19 | radiation | 1.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 694 | 73.21 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 696 | 73.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 708 | 73.25 | wind | 5.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 719 | 73.27 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 720 | 73.27 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 726 | 73.28 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 729 | 73.29 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 759 | 73.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 781 | 73.36 | wind | 5.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 782 | 73.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 805 | 73.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 812 | 73.41 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 909 | 73.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 947 | 73.61 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 953 | 73.61 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 956 | 73.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 957 | 73.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 959 | 73.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 961 | 73.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 980 | 73.65 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |