BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0780700 Os02g0780700|AK063558
(657 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14075.1 | chr3:4663819-4666338 REVERSE LENGTH=643 630 0.0
AT4G16070.1 | chr4:9096808-9100596 REVERSE LENGTH=655 551 e-157
AT2G42450.1 | chr2:17672425-17674854 REVERSE LENGTH=547 112 5e-25
AT3G49050.1 | chr3:18181498-18183613 FORWARD LENGTH=478 64 2e-10
AT4G00500.1 | chr4:225214-226978 REVERSE LENGTH=461 64 4e-10
AT5G37710.1 | chr5:14979159-14981400 FORWARD LENGTH=437 60 6e-09
>AT3G14075.1 | chr3:4663819-4666338 REVERSE LENGTH=643
Length = 642
Score = 630 bits (1625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/638 (55%), Positives = 428/638 (67%), Gaps = 28/638 (4%)
Query: 15 LLYYTLNRRLQVEKLNQEGDCGNERDAATRGALXXXXXXXXXXXXXXAPATWLETISTLS 74
LLYYTLNR+L + D N +A+R +L APATWLETISTLS
Sbjct: 15 LLYYTLNRKLIAGP--SDVDDENSEASASRPSLRIDRVSHRLIQ---APATWLETISTLS 69
Query: 75 ETLRFTYSETLGKWPIGDLAFGISFLLKRQGNVPVASIYAGDDSVELNGAPVIADLKHHL 134
ETLRFTYSETLGKWPIGDLAFGI+FL+KRQG + V ++ G DSVEL G+ V +LK+ L
Sbjct: 70 ETLRFTYSETLGKWPIGDLAFGINFLIKRQGLLHVDRVFGGKDSVELRGSEVATELKYLL 129
Query: 135 NLLTLCWHFSKKPFPLFLEATGYSSEDVLMQEPKAGILKPAFTIILDRDKQCILLLIRGT 194
+LLTLCWHFSKK FP FLE TG++ E+VL+ EPKAGILKPAFT+++D + + LLLIRGT
Sbjct: 130 HLLTLCWHFSKKSFPFFLEETGFTKENVLIHEPKAGILKPAFTVLVDHNTKYFLLLIRGT 189
Query: 195 HSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLGYAHFGMVAAARWIAKLAAPCLAQALHT 254
HSI+DTLTAATGA+VPFHHT+V E GVS+LVLGYAH GMVAAAR IAKLA PCL + L
Sbjct: 190 HSIKDTLTAATGAIVPFHHTVVNERGVSNLVLGYAHCGMVAAARCIAKLATPCLLKGLEQ 249
Query: 255 HPDYKIKIVGHSLGGGTAALLTYVLREQQEFASTTCVSFAPAACMTWDLAESGVHFITTV 314
+PDYKIKIVGHSLGGGTAALLTY++REQ+ ++ TCV+FAPAACMTW+LA+SG FI +V
Sbjct: 250 YPDYKIKIVGHSLGGGTAALLTYIMREQKMLSTATCVTFAPAACMTWELADSGNDFIVSV 309
Query: 315 INGADLVPTFSAASVDDLRSEVTASAWLNDLRHQIEQTRILSTFYRSASALGSRLPSIXX 374
INGADLVPTFSAA+VDDLR+EVTASAWLNDLR+QIE TRILST YRSA+ALGSRLPS+
Sbjct: 310 INGADLVPTFSAAAVDDLRAEVTASAWLNDLRNQIEHTRILSTVYRSATALGSRLPSMAT 369
Query: 375 XXXXXXXXXXILRPVSTGTQVVMRRARSVAQAAWTRPALQLSSWTCIGPXXXXXXXXXXX 434
+LRPVS+GTQVVMRRA+S+ TRPAL +SSW+C+GP
Sbjct: 370 AKAKVAGAGAMLRPVSSGTQVVMRRAQSM----LTRPALSISSWSCMGPRRRASATQSIS 425
Query: 435 XXXEEIRATTNDGXXXXXXXXXXXXIVKTE--TMQFAXXXXXXXXXXXXDAVGMMDEKVD 492
E + T++ +V E T ++ +G D +D
Sbjct: 426 ----EHQLDTSEAMSQDIPETSDPLLVTDEEITGKWKSEAECSNYEETSPRLGATD--LD 479
Query: 493 SDGEDIIDHHVDEDRMTDVELWQQLENELYRRS-----EDDEIVEDMTESAITEEVGGTA 547
+ ED + E+RMT+ ELWQQLE++LY S E D E E G A
Sbjct: 480 -ECEDPAEMDTREERMTEAELWQQLEHDLYHDSSEQPEETDVAKEIKEEEEAVIAEAGVA 538
Query: 548 EDVLSETNDKEVHRFYPPGKIMHILTSTIEETVSAEE-----SSVPHEDDTTGDSDTRIG 602
KE RF P GKIMHI+T E EE S++ + + R+G
Sbjct: 539 PPESQTAEMKESRRFLPAGKIMHIVTVRPEAVEPNEEEDEDGSALERPETVETVEEGRVG 598
Query: 603 IFLTPRSLYGKLRLSKMMINDHYMPIYRRNIEQLIAEL 640
IFLTPRSLY K+RLS+ MI+DH+MP+YRR IE+LI EL
Sbjct: 599 IFLTPRSLYSKVRLSQRMISDHFMPVYRRQIERLIQEL 636
>AT4G16070.1 | chr4:9096808-9100596 REVERSE LENGTH=655
Length = 654
Score = 551 bits (1419), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/409 (65%), Positives = 320/409 (78%), Gaps = 7/409 (1%)
Query: 15 LLYYTLNRRLQVEKLNQEGDCGNERDAATRGALXXXXXXXXXXXXXXAPATWLETISTLS 74
++ Y L+RR+ V N E D G E G APATWLETISTLS
Sbjct: 14 VILYLLSRRI-VWARNGEDDSGGEL-----GKSGRSGRRRIVRRPAQAPATWLETISTLS 67
Query: 75 ETLRFTYSETLGKWPIGDLAFGISFLLKRQGNVPVASIYAGDDSVELNGAPVIADLKHHL 134
ETLRFTYSETLGKWPI DLAFGI++L++RQGN P AS+YAG + +EL G +I DL L
Sbjct: 68 ETLRFTYSETLGKWPIADLAFGINYLMRRQGNFPTASVYAGSNCIELKGPEIIMDLTELL 127
Query: 135 NLLTLCWHFSKKPFPLFLEATGYSSEDVLMQEPKAGILKPAFTIILDRDKQCILLLIRGT 194
LTLC FSKKPF +FLE+ GY+ EDVL+Q+PKAGI++PAFTII D + +CILLLIRGT
Sbjct: 128 RFLTLCMLFSKKPFAVFLESAGYTHEDVLLQKPKAGIMQPAFTIIRDTNSKCILLLIRGT 187
Query: 195 HSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLGYAHFGMVAAARWIAKLAAPCLAQALHT 254
HSI+DTLTAATGAVVPFHH+++ +GG+S+LVLGYAH GMVAAARWIAKL+ PCL +AL
Sbjct: 188 HSIKDTLTAATGAVVPFHHSVLHDGGLSNLVLGYAHCGMVAAARWIAKLSVPCLLKALDE 247
Query: 255 HPDYKIKIVGHSLGGGTAALLTYVLREQQEFASTTCVSFAPAACMTWDLAESGVHFITTV 314
+P +K++IVGHSLGGGTA+LLTY+LREQ+EFAS TC +FAPAACMTWDLAESG HFITT+
Sbjct: 248 NPSFKVQIVGHSLGGGTASLLTYILREQKEFASATCFTFAPAACMTWDLAESGKHFITTI 307
Query: 315 INGADLVPTFSAASVDDLRSEVTASAWLNDLRHQIEQTRILSTFYRSASALGSRLPSIXX 374
ING+DLVPTFSA+SVDDLRSEVT+S+W NDLR Q+E TR+LS YRSA+A+GSRLPSI
Sbjct: 308 INGSDLVPTFSASSVDDLRSEVTSSSWSNDLRDQVEHTRVLSVVYRSATAIGSRLPSIAS 367
Query: 375 XXXXXXXXXXILRPVSTGTQVVMRRARSVAQAAWTRPALQLSSWTCIGP 423
ILRPVS+GTQV+++RA+ VAQA + LSSW+CIGP
Sbjct: 368 AKAKVAGAGAILRPVSSGTQVMLKRAQDVAQAV-VQTRSTLSSWSCIGP 415
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 505 EDRMTDVELWQQLENELYRRSEDDE-----------IVEDMTESAIT----EEVGGTAED 549
E+ +T+ ELW +L+ EL R+ + + E+ IT G
Sbjct: 500 EEDVTEGELWDELDRELTRQENERDSEAMEEEAAAAKEITEEETVITGGGDSSTGQNQSP 559
Query: 550 VLSETNDK-EVHRFYPPGKIMHILTSTIEETVSAEESSVPHEDDTTGDSDTRIGIFLTPR 608
V + + D E RFYPPGKIMHI++ T E+ E+ + R+ I+ TPR
Sbjct: 560 VSASSMDLIENQRFYPPGKIMHIVSVTETES----ETERDEVVVVGTTTVERVRIYETPR 615
Query: 609 SLYGKLRLSKMMINDHYMPIYRRNIEQLIAELEKDS 644
LY K+RLS+ MINDHYMP+Y++ +E LI ELE DS
Sbjct: 616 ELYRKIRLSRTMINDHYMPMYKKMMELLITELECDS 651
>AT2G42450.1 | chr2:17672425-17674854 REVERSE LENGTH=547
Length = 546
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 72 TLSETLRFTYSETLG--KWPIGDLAFGISFLLKRQGNVPVASIYAGDDSVELNGAPVIAD 129
+LSE + LG W GDL G+ + RQ ++ S + VE+ + D
Sbjct: 131 SLSEIIASIQRSRLGIEGWTFGDLTIGLYLIYLRQASL---SPFEDVKGVEVVSESTVYD 187
Query: 130 LKHHLNLLTLCWHFSKKPFPLFLEATGYSSEDVLMQEPKAGILKPAFTIILDRDKQCILL 189
L ++ L C+ S + T ++L + +++P + I +D ++ ++
Sbjct: 188 LIYNAELAKGCYRDSVSGLA---KNTMLRENNILKFVKDSSVMRPGYYIGVDHRRKLVVF 244
Query: 190 LIRGTHSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLGYA-HFGMVAAARWIAKLAAPCL 248
IRGTH+I D +T IV GY+ HFG AARW +
Sbjct: 245 GIRGTHTIYDLIT-----------DIVSSSDEEVTFEGYSTHFGTAEAARWFLNHELQTI 293
Query: 249 AQALHTHPDYKIKIVGHSLGGGTAALLTYVL----REQQEFAS--TTCVSFAPAACMTWD 302
+ L + YK+++VGHSLGG A+L+ +L RE+ F + + V +A C++ +
Sbjct: 294 RRCLAKYEGYKLRLVGHSLGGAIASLMAIMLKKMPREELGFDAEIISAVGYATPPCVSKE 353
Query: 303 LAESGVHFITTVINGADLVPTFSAASVDDLRSEVTASAW 341
LAE+ F+TT++ D++P SAAS+ LR+E+ + W
Sbjct: 354 LAENCSEFVTTIVMQDDIIPRLSAASLARLRNEILQTDW 392
>AT3G49050.1 | chr3:18181498-18183613 FORWARD LENGTH=478
Length = 477
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 174 PAFTIILDRDKQCILLLIRGTHSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLGYAHFGM 233
PA+ + LD Q I++ IRG + +++ A + + G GY H G+
Sbjct: 96 PAYILYLDHVHQDIVVAIRGLNLAKESDYAML---------LDNKLGERKFDGGYVHNGL 146
Query: 234 VAAARWIAKLAAPCLAQALHTHPDYKIKIVGHSLGGGTAALLT-YVLREQQEFAS----- 287
V +A ++ L + + +P Y + GHSLG G A +L V+R + +
Sbjct: 147 VKSAGYVLDEECKVLKELVKKYPSYTLTFAGHSLGSGVATMLALLVVRHPERLGNIDRKR 206
Query: 288 TTCVSFAPAACMTWDLAESGVHFITTVINGADLVPTFSAASVDDLRSEV 336
C + APA CM+ +LA I +VI D +P +A ++D+ V
Sbjct: 207 VRCFAIAPARCMSLNLAVRYADVINSVILQDDFLPR-TATPLEDIFKSV 254
>AT4G00500.1 | chr4:225214-226978 REVERSE LENGTH=461
Length = 460
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 176 FTIILDRDKQCILLLIRGTHSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLGYAHFGMVA 235
+ I LD + ++L IRG + ++ A + + G + GY H G++
Sbjct: 97 YMIYLDHENGDVVLAIRGLNLAKECDYAVL---------LDNKLGQTKFDGGYVHNGLLK 147
Query: 236 AARWIAKLAAPCLAQALHTHPDYKIKIVGHSLGGGTAALLTYVLREQQ------EFASTT 289
AA W+ + L + L +P Y + VGHSLG G +LL + + + E
Sbjct: 148 AAMWVFEEEHVVLRELLEANPSYSLTFVGHSLGAGVVSLLVLFVIQNRVRLGNIERKRIR 207
Query: 290 CVSFAPAACMTWDLAESGVHFITTVINGADLVPTFSAASVDDLRS 334
C + AP CM+ LA + I +V+ D +P + A + +S
Sbjct: 208 CFAIAPPRCMSLHLAVTYADVINSVVLQDDFLPRTTTALENVFKS 252
>AT5G37710.1 | chr5:14979159-14981400 FORWARD LENGTH=437
Length = 436
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 174 PAFTIILDRDKQCILLLIRGTHSIRDTLTAATGAVVPFHHTIVQEGGVSDLVLG--YAHF 231
P + I +D D + I+L IRG + +++ + I+ + + +LG Y H
Sbjct: 93 PPYIIYIDHDHREIVLAIRGLNLAKES-----------DYKILLDNKLGQKMLGGGYVHR 141
Query: 232 GMVAAARWIAKLAAPCLAQALHTH-PDYKIKIVGHSLGGGTAALLTYVLREQQEFA---- 286
G++ +A W+ + L + + +Y + GHSLG G AAL+ ++
Sbjct: 142 GLLKSAAWVLNQESETLWRVWEENGREYDLVFAGHSLGSGVAALMAVLVVNTPAMIGDIP 201
Query: 287 --STTCVSFAPAACMTWDLAESGVHFITTVINGADLVPTFSAASVDDLRSEV 336
C + APA CM+ +LA I++VI D +P +A ++D+ V
Sbjct: 202 RNKVRCFALAPARCMSLNLAVKYADVISSVILQDDFLPR-TATPLEDIFKSV 252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,315,538
Number of extensions: 480828
Number of successful extensions: 1455
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1442
Number of HSP's successfully gapped: 8
Length of query: 657
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 552
Effective length of database: 8,227,889
Effective search space: 4541794728
Effective search space used: 4541794728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)