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Os02g0780600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Methyltransferase type 12 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.65 (0.0205) R2 : 0.4
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.932 (0.0535) R2dC : 0.401 R2C : 0.398
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0501 (0.0432) R2dN8 : 0.00229 R2N8 : -0.000652
σ : 0.387
deviance : 68.4
__
_____
C
peak time of C : 17.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.88 0.332 7.62 0.789 0.929 -0.373 0.181 0.274 0.217 17.3 26.3 1282 -- --
49.9 0.329 7.61 0.741 0.928 -0.406 0.158 -- 0.206 17.3 36.6 1280 -- --
49.96 0.329 7.62 0.788 0.929 -0.375 -- 0.269 0.217 17.3 26.65 1280 -- --
49.96 0.329 7.62 0.734 0.927 -0.404 -- -- 0.201 17.3 36.64 1280 -- --
94.76 0.453 7.61 0.747 -- -0.42 -- 0.188 0.193 -- 23.62 1306 -- --
55.23 0.348 7.64 0.704 0.943 -- 0.203 -- 0.128 17 -- -- -- --
55.33 0.348 7.64 0.704 0.944 -- -- -- 0.129 17 -- -- -- --
94.79 0.453 7.61 0.71 -- -0.464 -- -- 0.191 -- 36.49 1305 -- --
55.95 0.348 7.66 -- 0.99 -1.04 -- -- 0.00292 16.9 68.56 2090 -- --
102.1 0.472 7.63 0.67 -- -- -- -- 0.104 -- -- -- -- --
68.4 0.387 7.65 -- 0.932 -- -- -- 0.0501 17.1 -- -- -- --
103.14 0.473 7.65 -- -- -1.03 -- -- 0.0172 -- 68.7 1476 -- --
113.95 0.498 7.64 -- -- -- -- -- 0.0301 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.39 atmosphere 1000.0 10 > th dose dependent rect. 2 6
5 47.65 atmosphere 1005.0 30 > th dose dependent rect. 24 8
6 47.68 atmosphere 1005.0 30 > th dose independent rect. 2 6
9 47.74 temperature 10.0 10 > th dose dependent rect. 8 18
12 47.85 wind 7.0 30 < th dose independent rect. 8 18
15 47.97 temperature 10.0 90 > th dose dependent rect. 7 8
19 48.15 temperature 10.0 270 > th dose dependent rect. 5 8
27 48.49 wind 5.0 30 < th dose independent rect. 2 6
28 48.52 wind 7.0 90 < th dose independent rect. 7 8
32 48.54 atmosphere 1005.0 270 > th dose independent rect. 24 6
36 48.60 precipitation 0.1 10 < th dose independent rect. 2 6
37 48.60 wind 9.0 30 < th dose dependent rect. 2 6
38 48.60 precipitation 0.1 10 < th dose dependent rect. 2 6
54 48.72 temperature 20.0 270 > th dose dependent rect. 7 4
59 48.76 wind 9.0 270 < th dose dependent rect. 6 8
68 48.82 temperature 25.0 270 > th dose independent rect. 7 6
75 48.84 wind 7.0 270 < th dose independent rect. 5 21
78 48.85 temperature 25.0 270 > th dose independent rect. 7 4
88 48.88 wind 9.0 30 < th dose dependent rect. 8 18
89 48.89 temperature 25.0 90 > th dose independent rect. 7 8
96 48.93 radiation 1.0 1440 > th dose dependent rect. 11 1
114 49.01 temperature 30.0 90 < th dose dependent rect. 2 18
115 49.02 wind 5.0 270 < th dose independent rect. 2 3
117 49.02 wind 9.0 1440 < th dose independent rect. 3 6
118 49.02 temperature 10.0 30 > th dose independent rect. 2 6
120 49.02 temperature 10.0 1440 > th dose independent rect. 3 6
123 49.02 temperature 30.0 30 < th dose independent rect. 2 6
124 49.02 humidity 50.0 30 > th dose independent rect. 2 6
126 49.02 humidity 50.0 1440 > th dose independent rect. 3 6
128 49.02 atmosphere 995.0 30 > th dose independent rect. 2 6
129 49.02 atmosphere 995.0 1440 > th dose independent rect. 3 6
130 49.02 atmosphere 1015.0 30 < th dose independent rect. 2 6
132 49.02 temperature 10.0 30 > th dose independent rect. 8 18
133 49.02 temperature 10.0 1440 > th dose independent rect. 9 18
156 49.08 precipitation 0.1 10 < th dose independent rect. 8 18
159 49.08 precipitation 0.1 10 < th dose dependent rect. 8 18
161 49.09 radiation 40.0 1440 < th dose dependent rect. 11 1
163 49.09 radiation 10.0 14400 < th dose dependent rect. 22 5
170 49.13 radiation 40.0 30 < th dose independent rect. 2 6
179 49.15 atmosphere 1015.0 1440 < th dose independent rect. 3 6
192 49.18 temperature 30.0 10 < th dose dependent rect. 4 16
193 49.19 atmosphere 1005.0 30 > th dose independent rect. 4 4
194 49.20 atmosphere 1010.0 10 < th dose independent rect. 8 7
230 49.30 temperature 15.0 90 > th dose independent rect. 7 8
243 49.34 atmosphere 1000.0 270 > th dose dependent rect. 2 3
247 49.35 precipitation 0.1 270 < th dose independent rect. 2 3
250 49.35 precipitation 0.1 270 < th dose dependent rect. 2 3
257 49.37 radiation 20.0 1440 < th dose dependent rect. 11 1
267 49.42 wind 5.0 270 < th dose independent rect. 7 4
281 49.48 wind 9.0 270 < th dose dependent rect. 2 3
301 49.52 wind 7.0 270 < th dose dependent rect. 7 4
306 49.53 atmosphere 995.0 30 > th dose independent rect. 8 18
318 49.56 temperature 10.0 10 > th dose dependent rect. 2 6
340 49.61 radiation 20.0 4320 > th dose dependent rect. 16 16
342 49.62 atmosphere 1010.0 30 < th dose independent rect. 8 18
351 49.64 temperature 15.0 270 > th dose independent rect. 5 21
352 49.64 radiation 1.0 270 < th dose dependent rect. 2 3
361 49.66 temperature 10.0 270 > th dose independent rect. 2 3
363 49.66 temperature 30.0 270 < th dose independent rect. 2 3
364 49.66 humidity 50.0 270 > th dose independent rect. 2 3
367 49.66 atmosphere 995.0 270 > th dose independent rect. 2 3
368 49.66 atmosphere 1010.0 270 < th dose independent rect. 2 3
370 49.66 radiation 20.0 270 < th dose independent rect. 2 3
376 49.66 radiation 40.0 270 < th dose dependent rect. 2 3
382 49.67 radiation 20.0 270 < th dose dependent rect. 2 3
386 49.68 radiation 1.0 270 < th dose independent rect. 2 3
393 49.68 temperature 10.0 270 > th dose dependent rect. 20 15
457 49.77 atmosphere 1000.0 10 > th dose dependent rect. 4 4
460 49.78 precipitation 0.1 90 < th dose independent rect. 7 8
463 49.78 precipitation 0.1 90 < th dose dependent rect. 7 8
480 49.82 radiation 40.0 1440 < th dose independent rect. 11 1
494 49.82 precipitation 0.1 270 < th dose independent rect. 5 21
497 49.82 precipitation 0.1 270 < th dose dependent rect. 5 21
510 49.84 temperature 10.0 90 > th dose independent rect. 15 16
532 49.86 radiation 40.0 90 < th dose independent rect. 15 16
533 49.86 humidity 50.0 10 > th dose independent rect. 8 18
534 49.86 radiation 40.0 10 < th dose independent rect. 8 18
535 49.86 temperature 25.0 90 < th dose independent rect. 2 19
539 49.87 atmosphere 995.0 90 > th dose independent rect. 7 8
571 49.90 precipitation 0.1 10 < th dose independent rect. 4 4
575 49.90 precipitation 0.1 10 < th dose dependent rect. 4 4
577 49.91 precipitation 0.1 90 < th dose independent rect. 15 16
584 49.91 precipitation 0.1 90 < th dose dependent rect. 15 16
586 49.92 wind 5.0 10 < th dose independent rect. 4 4
587 49.92 atmosphere 995.0 90 > th dose independent rect. 15 16
590 49.92 wind 9.0 10 < th dose dependent rect. 4 4
609 49.94 radiation 1.0 270 < th dose dependent rect. 2 9
614 49.95 wind 9.0 90 < th dose independent rect. 15 16
620 49.96 temperature 10.0 10 > th dose independent rect. 4 4
622 49.96 temperature 30.0 10 < th dose independent rect. 4 4
623 49.96 humidity 50.0 10 > th dose independent rect. 4 4
625 49.96 atmosphere 995.0 10 > th dose independent rect. 4 4
626 49.96 atmosphere 1015.0 10 < th dose independent rect. 4 4
627 49.96 temperature 10.0 10 > th dose independent rect. 8 20
637 49.97 radiation 30.0 10 < th dose independent rect. 4 4
714 50.01 wind 1.0 270 > th dose independent rect. 3 1
728 50.02 radiation 20.0 1440 < th dose independent rect. 9 5
752 50.04 wind 7.0 270 < th dose independent rect. 21 14
764 50.05 radiation 10.0 1440 < th dose independent rect. 11 5
765 50.05 precipitation 0.1 10 < th dose independent rect. 15 17
772 50.05 precipitation 0.1 10 < th dose dependent rect. 15 17
825 50.11 temperature 20.0 10 > th dose independent rect. 8 7
848 50.13 temperature 30.0 270 < th dose dependent rect. 2 3
868 50.15 humidity 50.0 270 > th dose dependent rect. 2 3
873 50.15 wind 9.0 10 < th dose dependent rect. 15 17
923 50.19 temperature 30.0 90 < th dose dependent rect. 2 11
926 50.20 humidity 70.0 1440 > th dose independent rect. 11 1
980 50.23 radiation 1.0 1440 > th dose dependent rect. 10 4
990 50.24 wind 1.0 270 > th dose independent rect. 1 5
991 50.24 humidity 70.0 4320 > th dose independent rect. 22 5