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Os02g0769100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Auxin responsive SAUR protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0232) R2 : 0.6
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.44 (0.0552) R2dC : 0.598 R2C : 0.596
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0928 (0.0488) R2dN8 : 0.00409 R2N8 : 0.00287
σ : 0.438
deviance : 87.49
__
_____
C
peak time of C : 12.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.28 0.402 12.1 0.155 1.44 0.503 0.362 0.378 -0.158 12.1 1015 6399 -- --
73.94 0.401 12.1 0.0598 1.44 0.519 0.402 -- -0.187 12.1 1015 6401 -- --
73.84 0.4 12.1 0.173 1.44 0.505 -- 0.388 -0.155 12.1 1015 6344 -- --
74.53 0.402 12.1 0.0647 1.44 0.52 -- -- -0.183 12.1 1015 6322 -- --
204.49 0.666 12.1 0.0944 -- 0.51 -- 0.356 -0.185 -- 1015 6884 -- --
85.53 0.434 12 0.211 1.44 -- 0.377 -- -0.0693 12.1 -- -- -- --
86.14 0.435 12 0.226 1.44 -- -- -- -0.0676 12.1 -- -- -- --
205.09 0.667 12.1 -0.00916 -- 0.522 -- -- -0.212 -- 1015 6802 -- --
74.63 0.402 12.1 -- 1.44 0.529 -- -- -0.192 12.1 1015 6395 -- --
217.19 0.689 12.1 0.18 -- -- -- -- -0.0885 -- -- -- -- --
87.49 0.438 12 -- 1.44 -- -- -- -0.0928 12.1 -- -- -- --
205.09 0.667 12.1 -- -- 0.52 -- -- -0.21 -- 1015 6802 -- --
218.05 0.689 12.1 -- -- -- -- -- -0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.27 wind 1 14400 < th dose independent rect. 6 1
2 73.36 humidity 70 14400 < th dose independent rect. 20 13
3 73.44 wind 1 14400 < th dose dependent rect. 6 2
5 73.48 humidity 70 14400 < th dose independent rect. 7 2
18 73.74 wind 1 14400 < th dose dependent rect. 6 5
19 73.75 wind 1 14400 < th dose dependent rect. 4 7
20 73.76 humidity 70 14400 > th dose independent rect. 20 13
21 73.84 wind 1 14400 > th dose independent rect. 6 1
26 73.96 humidity 70 14400 > th dose independent rect. 6 3
29 73.98 humidity 70 14400 > th dose independent rect. 24 9
37 74.02 atmosphere 1015 4320 > th dose independent rect. 10 1
38 74.03 atmosphere 1015 4320 < th dose independent rect. 10 1
42 74.12 wind 1 14400 < th dose independent rect. 4 7
54 74.23 wind 1 14400 < th dose independent rect. 4 9
58 74.26 wind 1 14400 < th dose independent rect. 6 5
60 74.28 atmosphere 1015 4320 > th dose dependent rect. 20 1
61 74.30 wind 1 14400 > th dose independent rect. 4 7
63 74.31 humidity 50 4320 > th dose independent rect. 14 3
67 74.35 wind 1 14400 > th dose independent rect. 4 9
68 74.38 humidity 50 4320 > th dose independent rect. 13 22
70 74.41 atmosphere 1015 4320 > th dose independent rect. 20 1
72 74.42 humidity 50 4320 > th dose independent rect. 13 9
73 74.42 atmosphere 1015 4320 < th dose independent rect. 20 16
84 74.45 atmosphere 1015 4320 > th dose independent rect. 20 16
87 74.45 humidity 50 4320 > th dose independent rect. 13 18
88 74.45 humidity 80 14400 < th dose dependent rect. 8 1
93 74.46 atmosphere 1015 4320 > th dose dependent rect. 13 9
100 74.48 humidity 50 4320 > th dose independent rect. 13 16
105 74.48 atmosphere 1015 4320 > th dose dependent rect. 8 1
106 74.48 atmosphere 1015 4320 > th dose dependent rect. 8 3
108 74.49 humidity 50 4320 > th dose independent sin 17 NA
116 74.50 atmosphere 1015 4320 > th dose independent rect. 15 6
126 74.51 wind 1 14400 > th dose independent rect. 6 5
135 74.52 atmosphere 1015 4320 > th dose independent rect. 8 16
141 74.52 atmosphere 1015 4320 > th dose dependent rect. 10 14
153 74.54 atmosphere 1015 4320 < th dose independent rect. 21 1
161 74.55 atmosphere 1015 4320 < th dose independent rect. 8 18
183 74.56 atmosphere 1015 4320 > th dose dependent rect. 12 11
213 74.58 atmosphere 1015 4320 > th dose dependent sin 18 NA
215 74.58 humidity 70 14400 < th dose dependent rect. 19 14
240 74.61 humidity 50 4320 > th dose independent rect. 11 11
279 74.63 humidity 50 4320 > th dose independent rect. 11 20
282 74.63 humidity 50 4320 > th dose independent rect. 11 22
310 74.65 atmosphere 1015 4320 < th dose independent rect. 20 5
317 74.65 humidity 50 4320 > th dose independent rect. 11 18
340 74.65 atmosphere 1015 14400 > th dose dependent rect. 5 2
373 74.67 atmosphere 1015 4320 < th dose independent rect. 20 7
392 74.67 atmosphere 1015 4320 > th dose dependent rect. 21 14
394 74.68 atmosphere 1015 4320 < th dose independent no NA NA
411 74.68 atmosphere 1015 4320 < th dose independent rect. 2 22
426 74.69 atmosphere 1015 4320 < th dose independent sin 7 NA
438 74.69 humidity 50 4320 > th dose independent rect. 3 19
456 74.70 atmosphere 1015 4320 > th dose independent sin 19 NA
457 74.70 atmosphere 1015 4320 > th dose independent no NA NA
465 74.70 humidity 50 4320 > th dose independent rect. 8 14
466 74.70 humidity 50 4320 > th dose independent rect. 5 17
484 74.71 atmosphere 1015 4320 > th dose independent sin 7 NA
541 74.72 humidity 50 4320 > th dose independent rect. 8 23
545 74.72 atmosphere 1015 4320 < th dose independent rect. 23 23
547 74.72 humidity 70 14400 < th dose dependent rect. 6 3
564 74.73 atmosphere 1015 4320 > th dose independent rect. 1 11
592 74.74 humidity 50 4320 > th dose independent rect. 14 1
613 74.74 humidity 50 4320 > th dose independent rect. 8 21
624 74.74 atmosphere 1015 4320 > th dose independent rect. 23 23
632 74.75 humidity 50 4320 > th dose independent no NA NA
671 74.75 humidity 50 4320 > th dose independent rect. 20 23
683 74.76 atmosphere 1015 4320 > th dose independent rect. 20 7
726 74.77 atmosphere 1015 4320 < th dose independent sin 18 NA
757 74.77 humidity 50 4320 < th dose independent rect. 16 23
758 74.77 wind 3 14400 < th dose dependent rect. 1 1
947 74.84 humidity 50 4320 < th dose independent rect. 11 7
978 74.84 atmosphere 1015 4320 > th dose dependent sin 7 NA
991 74.85 humidity 50 4320 < th dose independent sin 0 NA