Os02g0768000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0768000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.5 | 0.597 | 5.8 | 3.99 | 0.732 | -0.514 | -0.226 | -1.22 | 1.02 | 8 | 1001 | 5481 | -- | -- |
| 162.63 | 0.594 | 5.8 | 4.02 | 0.729 | -0.609 | -0.226 | -- | 1.01 | 8 | 1001 | 6229 | -- | -- |
| 161.65 | 0.592 | 5.8 | 3.99 | 0.733 | -0.514 | -- | -1.2 | 1.02 | 8.01 | 1001 | 5539 | -- | -- |
| 162.78 | 0.594 | 5.79 | 4.02 | 0.731 | -0.612 | -- | -- | 1.01 | 8.03 | 1001 | 6220 | -- | -- |
| 190.9 | 0.644 | 5.82 | 3.98 | -- | -0.493 | -- | -1.42 | 1.03 | -- | 1003 | 5407 | -- | -- |
| 170.27 | 0.612 | 5.78 | 3.95 | 0.729 | -- | -0.234 | -- | 1.07 | 7.99 | -- | -- | -- | -- |
| 170.43 | 0.611 | 5.78 | 3.94 | 0.729 | -- | -- | -- | 1.07 | 8 | -- | -- | -- | -- |
| 192.03 | 0.645 | 5.81 | 4.02 | -- | -0.611 | -- | -- | 1.02 | -- | 1002 | 6169 | -- | -- |
| 572.69 | 1.11 | 5.88 | -- | 0.762 | -1.16 | -- | -- | 0.616 | 7.59 | 991.8 | 2736 | -- | -- |
| 199.48 | 0.66 | 5.8 | 3.95 | -- | -- | -- | -- | 1.07 | -- | -- | -- | -- | -- |
| 580.33 | 1.13 | 5.88 | -- | 0.758 | -- | -- | -- | 0.626 | 7.63 | -- | -- | -- | -- |
| 585.78 | 1.13 | 5.89 | -- | -- | 1.07 | -- | -- | 0.664 | -- | 1071 | 8353 | -- | -- |
| 611.21 | 1.15 | 5.9 | -- | -- | -- | -- | -- | 0.636 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.33 | humidity | 90 | 10 | < th | dose dependent | rect. | 19 | 12 |
| 9 | 157.40 | humidity | 90 | 30 | < th | dose dependent | rect. | 18 | 9 |
| 18 | 157.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 27 | 157.94 | humidity | 80 | 270 | < th | dose independent | rect. | 16 | 14 |
| 28 | 157.95 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 29 | 157.96 | humidity | 80 | 270 | < th | dose independent | rect. | 16 | 12 |
| 35 | 158.28 | radiation | 40 | 720 | > th | dose independent | rect. | 14 | 2 |
| 53 | 158.35 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 54 | 158.51 | humidity | 60 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 56 | 158.58 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 58 | 158.67 | humidity | 60 | 43200 | < th | dose independent | sin | 5 | NA |
| 59 | 158.68 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 61 | 158.69 | radiation | 40 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 64 | 158.79 | humidity | 70 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 67 | 158.88 | humidity | 60 | 43200 | > th | dose independent | sin | 6 | NA |
| 68 | 158.90 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 75 | 158.97 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 9 | 8 |
| 77 | 159.05 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 84 | 159.09 | humidity | 70 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 87 | 159.09 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 90 | 159.10 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 92 | 159.11 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 99 | 159.12 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 110 | 159.15 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 124 | 159.19 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 135 | 159.20 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 146 | 159.24 | humidity | 80 | 270 | < th | dose independent | sin | 13 | NA |
| 150 | 159.25 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 162 | 159.29 | humidity | 70 | 43200 | < th | dose dependent | sin | 6 | NA |
| 171 | 159.34 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 176 | 159.36 | humidity | 70 | 43200 | < th | dose dependent | rect. | 16 | 20 |
| 190 | 159.40 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 220 | 159.46 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 301 | 159.54 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 313 | 159.55 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 332 | 159.57 | humidity | 60 | 43200 | < th | dose independent | no | NA | NA |
| 372 | 159.62 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 388 | 159.68 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 411 | 159.71 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 7 |
| 422 | 159.74 | wind | 9 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 427 | 159.75 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 1 |
| 429 | 159.75 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 494 | 159.91 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 499 | 159.93 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 534 | 160.00 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 542 | 160.00 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 561 | 160.02 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 4 |
| 578 | 160.03 | atmosphere | 1005 | 720 | < th | dose dependent | sin | 23 | NA |
| 581 | 160.04 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 16 |
| 583 | 160.04 | radiation | 40 | 720 | > th | dose dependent | rect. | 14 | 2 |
| 633 | 160.08 | radiation | 10 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 639 | 160.08 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 8 | 11 |
| 646 | 160.09 | radiation | 1 | 270 | > th | dose dependent | rect. | 17 | 2 |
| 674 | 160.12 | radiation | 10 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 715 | 160.15 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 722 | 160.16 | radiation | 10 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 734 | 160.17 | radiation | 10 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 765 | 160.20 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 6 |
| 794 | 160.22 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 20 |
| 801 | 160.23 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 814 | 160.24 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 17 | 2 |
| 835 | 160.26 | humidity | 60 | 43200 | > th | dose independent | no | NA | NA |
| 840 | 160.26 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 845 | 160.27 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 889 | 160.31 | wind | 5 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 910 | 160.33 | humidity | 80 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 926 | 160.34 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 14 |
| 940 | 160.36 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 977 | 160.39 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 3 |