Os02g0767700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0767700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.69 | 0.64 | 8.14 | -2 | 0.77 | 2.07 | -1.37 | -3.75 | -0.721 | 6.07 | 25.44 | 99 | -- | -- |
| 189.99 | 0.642 | 8.08 | -1.58 | 0.762 | 1.73 | -1.08 | -- | -0.624 | 6.42 | 25.17 | 118 | -- | -- |
| 189.82 | 0.642 | 8.12 | -1.93 | 0.776 | 2.1 | -- | -2.98 | -0.685 | 5.95 | 25.59 | 99 | -- | -- |
| 192.46 | 0.646 | 8.09 | -1.61 | 0.794 | 1.82 | -- | -- | -0.629 | 6.14 | 25.17 | 120 | -- | -- |
| 208.37 | 0.676 | 8.12 | -1.8 | -- | 1.76 | -- | -3.28 | -0.605 | -- | 26.36 | 12 | -- | -- |
| 243.84 | 0.732 | 8.06 | -1.29 | 0.436 | -- | -0.907 | -- | -0.505 | 9.52 | -- | -- | -- | -- |
| 245.96 | 0.734 | 8.06 | -1.32 | 0.447 | -- | -- | -- | -0.503 | 10.6 | -- | -- | -- | -- |
| 211.45 | 0.677 | 8.08 | -1.51 | -- | 1.5 | -- | -- | -0.546 | -- | 26.2 | 9 | -- | -- |
| 257.39 | 0.747 | 8.03 | -- | 0.62 | 1.44 | -- | -- | -0.396 | 6.9 | 25.79 | 115 | -- | -- |
| 258.29 | 0.751 | 8.08 | -1.32 | -- | -- | -- | -- | -0.505 | -- | -- | -- | -- | -- |
| 291.6 | 0.799 | 8.03 | -- | 0.457 | -- | -- | -- | -0.356 | 10.8 | -- | -- | -- | -- |
| 270.37 | 0.766 | 8.05 | -- | -- | 1.29 | -- | -- | -0.371 | -- | 26.31 | 8 | -- | -- |
| 304.56 | 0.815 | 8.04 | -- | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.34 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 2 | 176.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 30 | 180.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 120 | 184.56 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 125 | 184.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 128 | 184.83 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 174 | 185.58 | temperature | 25 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 202 | 185.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 213 | 186.02 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 243 | 186.27 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 322 | 187.31 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 419 | 188.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 441 | 188.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 460 | 188.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 533 | 188.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 552 | 188.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 941 | 191.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 976 | 191.50 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 23 |