Os02g0767000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os02g0767000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.04 | 0.361 | 9.28 | 0.431 | 0.236 | -1.23 | 0.974 | -0.152 | 0.236 | 6.4 | 52 | 1284 | -- | -- |
| 59.08 | 0.358 | 9.28 | 0.417 | 0.236 | -1.24 | 0.983 | -- | 0.233 | 6.34 | 51.99 | 1282 | -- | -- |
| 61.36 | 0.365 | 9.28 | 0.445 | 0.247 | -1.24 | -- | -0.164 | 0.236 | 6.83 | 51.95 | 1279 | -- | -- |
| 61.4 | 0.365 | 9.28 | 0.426 | 0.247 | -1.27 | -- | -- | 0.229 | 7.04 | 52 | 1267 | -- | -- |
| 64.3 | 0.373 | 9.28 | 0.445 | -- | -1.25 | -- | -0.158 | 0.24 | -- | 52 | 1303 | -- | -- |
| 93.26 | 0.453 | 9.27 | 0.497 | 0.346 | -- | 1 | -- | 0.288 | 4.78 | -- | -- | -- | -- |
| 95.84 | 0.458 | 9.27 | 0.492 | 0.352 | -- | -- | -- | 0.283 | 4.49 | -- | -- | -- | -- |
| 64.34 | 0.374 | 9.29 | 0.432 | -- | -1.26 | -- | -- | 0.236 | -- | 52 | 1302 | -- | -- |
| 66.09 | 0.379 | 9.29 | -- | 0.243 | -1.27 | -- | -- | 0.188 | 6.78 | 49 | 1280 | -- | -- |
| 102.47 | 0.473 | 9.27 | 0.506 | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
| 102.22 | 0.473 | 9.28 | -- | 0.361 | -- | -- | -- | 0.228 | 4.46 | -- | -- | -- | -- |
| 69.12 | 0.387 | 9.3 | -- | -- | -1.28 | -- | -- | 0.189 | -- | 49 | 1299 | -- | -- |
| 109.22 | 0.488 | 9.29 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.27 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 12 | 58.91 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 14 | 59.00 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 46 | 59.45 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 53 | 59.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 59 | 59.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 63 | 59.69 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 70 | 59.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 124 | 60.39 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 126 | 60.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 131 | 60.46 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 133 | 60.50 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 135 | 60.51 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 142 | 60.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 149 | 60.58 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 188 | 60.76 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 220 | 60.83 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 317 | 61.08 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 330 | 61.11 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 342 | 61.14 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 396 | 61.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 397 | 61.28 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 442 | 61.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 446 | 61.42 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 458 | 61.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 475 | 61.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 499 | 61.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 511 | 61.59 | humidity | 90 | 1440 | < th | dose dependent | sin | 18 | NA |
| 539 | 61.64 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 12 |
| 552 | 61.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 584 | 61.73 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 685 | 61.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 705 | 61.97 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 731 | 62.02 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 836 | 62.18 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 838 | 62.19 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 842 | 62.19 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 844 | 62.20 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 850 | 62.21 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 905 | 62.30 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 907 | 62.31 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 18 |
| 957 | 62.40 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 986 | 62.47 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 8 |