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Os02g0761200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.59 (0.0285) R2 : 0.00628
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.102 (0.06) R2dN8 : 0.0081 R2N8 : 0.00628
σ : 0.536
deviance : 132.1
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.67 0.458 7.67 0.527 0.451 -0.176 0.166 -3.5 0.0759 0.98 10 4320 -- --
109.15 0.487 7.59 0.557 0.48 -0.193 0.221 -- 0.13 0.859 20.06 3634 -- --
96.79 0.458 7.67 0.527 0.451 -0.176 -- -3.5 0.0759 0.98 10 4320 -- --
109.08 0.486 7.59 0.499 0.496 -0.243 -- -- 0.116 1.41 20.76 3620 -- --
109.43 0.487 7.67 0.527 -- -0.176 -- -3.5 0.0759 -- 10 4320 -- --
110.29 0.492 7.58 0.533 0.472 -- 0.232 -- 0.154 0.999 -- -- -- --
110.51 0.492 7.58 0.525 0.472 -- -- -- 0.153 1.05 -- -- -- --
113.03 0.497 7.58 0.509 -- 0.332 -- -- 0.135 -- 10 4320 -- --
115.49 0.501 7.59 -- 0.498 -0.244 -- -- 0.112 1.4 50.1 3501 -- --
124.35 0.521 7.57 0.542 -- -- -- -- 0.162 -- -- -- -- --
117.76 0.508 7.59 -- 0.481 -- -- -- 0.0943 1.1 -- -- -- --
119.76 0.511 7.59 -- -- 0.346 -- -- 0.076 -- 9.473 27839 -- --
132.1 0.536 7.59 -- -- -- -- -- 0.102 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.14 radiation 10 4320 > th dose dependent rect. 16 16
2 94.27 humidity 60 43200 < th dose dependent rect. 7 2
4 94.32 radiation 10 4320 < th dose dependent rect. 24 5
5 94.42 humidity 60 43200 < th dose dependent rect. 19 14
8 94.57 radiation 30 4320 < th dose independent rect. 16 16
13 94.79 radiation 30 14400 < th dose dependent rect. 24 5
15 94.90 radiation 40 4320 < th dose dependent rect. 18 11
16 94.91 humidity 50 43200 > th dose independent rect. 20 14
23 95.12 humidity 90 14400 > th dose dependent rect. 5 2
24 95.13 humidity 90 14400 > th dose dependent rect. 24 15
25 95.15 temperature 20 4320 < th dose independent rect. 18 6
28 95.16 radiation 40 4320 < th dose dependent rect. 18 2
40 95.27 humidity 50 43200 > th dose independent rect. 6 4
50 95.33 humidity 60 43200 < th dose independent rect. 8 1
57 95.35 temperature 20 4320 > th dose independent rect. 18 6
75 95.47 humidity 90 14400 < th dose independent rect. 23 1
87 95.54 humidity 50 43200 < th dose independent rect. 20 14
89 95.54 humidity 60 43200 < th dose dependent rect. 19 2
92 95.55 humidity 90 14400 > th dose dependent sin 6 NA
110 95.63 humidity 90 14400 > th dose dependent rect. 23 3
112 95.64 temperature 20 4320 < th dose independent rect. 22 1
114 95.64 humidity 50 43200 < th dose independent rect. 7 3
120 95.66 humidity 60 43200 > th dose independent rect. 15 9
121 95.66 humidity 60 43200 < th dose independent rect. 15 9
146 95.73 humidity 60 43200 < th dose independent rect. 19 3
156 95.76 humidity 90 14400 > th dose independent rect. 22 9
160 95.76 humidity 90 14400 > th dose dependent rect. 24 1
171 95.79 humidity 90 43200 < th dose independent rect. 6 1
182 95.81 temperature 20 4320 > th dose independent rect. 21 2
188 95.82 humidity 90 43200 > th dose independent rect. 6 1
227 95.91 humidity 60 43200 > th dose independent rect. 19 4
232 95.91 humidity 60 43200 > th dose independent rect. 13 21
234 95.92 humidity 60 43200 > th dose independent sin 15 NA
237 95.92 radiation 40 43200 < th dose dependent rect. 18 2
246 95.93 humidity 60 43200 > th dose independent rect. 14 19
263 95.95 humidity 90 14400 > th dose independent rect. 23 12
268 95.96 humidity 60 43200 < th dose independent sin 15 NA
275 95.96 humidity 60 43200 < th dose independent rect. 13 21
297 95.98 radiation 1 14400 > th dose dependent rect. 18 11
320 96.01 humidity 90 14400 > th dose dependent rect. 22 5
349 96.05 radiation 20 43200 < th dose independent rect. 24 6
354 96.05 radiation 40 43200 < th dose dependent rect. 18 10
368 96.07 humidity 90 14400 > th dose independent rect. 4 3
384 96.08 wind 7 43200 > th dose independent rect. 22 1
397 96.09 humidity 90 14400 < th dose independent rect. 22 3
398 96.09 humidity 90 14400 > th dose independent rect. 22 4
408 96.09 humidity 50 43200 < th dose dependent sin 10 NA
417 96.10 humidity 60 43200 > th dose independent rect. 4 20
422 96.10 humidity 60 43200 > th dose independent rect. 18 23
423 96.10 radiation 1 14400 > th dose dependent rect. 18 1
438 96.11 humidity 50 43200 > th dose independent sin 10 NA
449 96.12 humidity 60 43200 > th dose independent no NA NA
537 96.16 radiation 1 4320 < th dose dependent rect. 18 7
540 96.16 radiation 40 43200 < th dose dependent rect. 18 8
552 96.17 humidity 70 43200 < th dose dependent rect. 17 3
559 96.18 wind 7 43200 < th dose independent rect. 22 1
569 96.18 humidity 60 43200 < th dose independent rect. 4 19
577 96.18 humidity 70 43200 < th dose dependent rect. 16 7
611 96.20 humidity 50 43200 < th dose independent sin 9 NA
665 96.21 humidity 50 43200 < th dose dependent rect. 17 19
690 96.23 humidity 60 43200 < th dose independent no NA NA
706 96.23 humidity 60 43200 < th dose independent rect. 18 23
715 96.23 radiation 1 4320 < th dose dependent rect. 18 16
728 96.24 radiation 10 4320 > th dose dependent rect. 5 3
742 96.25 temperature 20 4320 > th dose independent rect. 18 1
751 96.25 radiation 10 4320 < th dose independent rect. 13 19
789 96.27 radiation 1 4320 < th dose independent rect. 24 5
804 96.28 radiation 10 4320 < th dose independent sin 13 NA
855 96.30 wind 7 43200 > th dose dependent rect. 22 1
856 96.30 temperature 20 4320 < th dose dependent rect. 23 1
863 96.31 temperature 20 90 > th dose independent rect. 19 12
878 96.31 radiation 10 4320 < th dose independent rect. 11 22
905 96.33 temperature 20 4320 < th dose independent rect. 18 1
908 96.33 radiation 1 14400 < th dose independent rect. 18 11
985 96.38 humidity 90 43200 > th dose dependent rect. 13 1