Os02g0756100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0756100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 264.58 | 0.764 | 6.72 | -3.13 | 1.54 | 2.58 | 2.5 | -4.09 | -0.508 | 1.13 | 15.07 | 4331 | -- | -- |
| 285.66 | 0.787 | 6.65 | -2.77 | 1.57 | 2.91 | 2.44 | -- | -0.666 | 1.15 | 11.9 | 11404 | -- | -- |
| 289.66 | 0.793 | 6.72 | -3.21 | 1.59 | 2.57 | -- | -3.91 | -0.518 | 1.29 | 15.2 | 4560 | -- | -- |
| 308.88 | 0.819 | 6.66 | -2.82 | 1.55 | 2.94 | -- | -- | -0.671 | 1.2 | 4.595 | 11365 | -- | -- |
| 416 | 0.95 | 6.7 | -3.11 | -- | 2.97 | -- | -3.85 | -0.592 | -- | 16.15 | 2516 | -- | -- |
| 423.48 | 0.965 | 6.43 | -0.883 | 1.65 | -- | 2.51 | -- | 0.306 | 1.19 | -- | -- | -- | -- |
| 449.48 | 0.993 | 6.44 | -0.973 | 1.65 | -- | -- | -- | 0.291 | 1.31 | -- | -- | -- | -- |
| 426.63 | 0.962 | 6.56 | -2.11 | -- | 3.08 | -- | -- | -0.306 | -- | 14.5 | 2509 | -- | -- |
| 402.59 | 0.935 | 6.48 | -- | 1.43 | 1.63 | -- | -- | 0.112 | 1.2 | 16.68 | 2657 | -- | -- |
| 616.93 | 1.16 | 6.42 | -0.908 | -- | -- | -- | -- | 0.325 | -- | -- | -- | -- | -- |
| 474.4 | 1.02 | 6.42 | -- | 1.63 | -- | -- | -- | 0.399 | 1.28 | -- | -- | -- | -- |
| 522.48 | 1.06 | 6.48 | -- | -- | 2.04 | -- | -- | 0.0684 | -- | 16.9 | 2469 | -- | -- |
| 638.69 | 1.18 | 6.39 | -- | -- | -- | -- | -- | 0.426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.69 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 2 | 259.68 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 3 | 260.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 5 | 261.02 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 7 | 261.13 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 9 | 261.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 10 | 261.33 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 13 | 261.40 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 17 | 261.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 19 | 261.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 261.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 29 | 261.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 30 | 261.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 31 | 261.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 33 | 261.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 39 | 262.03 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 43 | 262.19 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 53 | 262.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 59 | 262.42 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 65 | 262.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 71 | 262.68 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 77 | 262.88 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 78 | 262.88 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 85 | 262.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 86 | 262.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 92 | 263.03 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 101 | 263.19 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 120 | 263.51 | temperature | 20.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 123 | 263.57 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 15 |
| 131 | 263.66 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 174 | 264.01 | temperature | 20.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 190 | 264.14 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 191 | 264.15 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 14 | 21 |
| 198 | 264.20 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 18 |
| 203 | 264.24 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 212 | 264.27 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 2 | 21 |
| 215 | 264.28 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 260 | 264.44 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 264 | 264.44 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 22 | 22 |
| 301 | 264.52 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 306 | 264.54 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 310 | 264.55 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 318 | 264.57 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 327 | 264.59 | temperature | 15.0 | 4320 | > th | dose dependent | no | NA | NA |
| 334 | 264.60 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 371 | 264.66 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 396 | 264.69 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 482 | 264.84 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 488 | 264.85 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 519 | 264.90 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 536 | 264.94 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 563 | 264.98 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 577 | 265.00 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 697 | 265.17 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 705 | 265.17 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 724 | 265.19 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 859 | 265.31 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 12 |