Os02g0754900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disulfide isomerase.
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Os02g0754900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disulfide isomerase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.39 | 0.144 | 12.2 | -0.336 | 0.394 | -0.389 | 0.16 | 0.262 | -0.25 | 23.1 | 24.8 | 5139 | -- | -- |
| 9.44 | 0.143 | 12.2 | -0.267 | 0.393 | -0.381 | 0.133 | -- | -0.239 | 23.1 | 24.69 | 5113 | -- | -- |
| 9.5 | 0.144 | 12.2 | -0.34 | 0.393 | -0.39 | -- | 0.25 | -0.25 | 23 | 24.79 | 5140 | -- | -- |
| 9.53 | 0.144 | 12.2 | -0.266 | 0.395 | -0.379 | -- | -- | -0.234 | 23 | 24.7 | 5113 | -- | -- |
| 18.69 | 0.201 | 12.2 | -0.39 | -- | -0.469 | -- | 0.373 | -0.25 | -- | 25.58 | 5290 | -- | -- |
| 13.49 | 0.172 | 12.2 | -0.0949 | 0.427 | -- | 0.181 | -- | -0.141 | 23.1 | -- | -- | -- | -- |
| 13.63 | 0.173 | 12.2 | -0.102 | 0.426 | -- | -- | -- | -0.141 | 23.1 | -- | -- | -- | -- |
| 18.47 | 0.2 | 12.2 | -0.278 | -- | -0.499 | -- | -- | -0.242 | -- | 25.07 | 3835 | -- | -- |
| 11.13 | 0.155 | 12.2 | -- | 0.4 | -0.287 | -- | -- | -0.182 | 23 | 24.7 | 5131 | -- | -- |
| 24.96 | 0.233 | 12.1 | -0.0922 | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
| 13.9 | 0.174 | 12.2 | -- | 0.425 | -- | -- | -- | -0.13 | 23.1 | -- | -- | -- | -- |
| 20.26 | 0.21 | 12.2 | -- | -- | -0.409 | -- | -- | -0.2 | -- | 25.1 | 3834 | -- | -- |
| 25.18 | 0.234 | 12.1 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 5 | 9.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 6 | 9.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 9 | 9.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 10 | 9.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 11 | 9.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 20 | 9.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 22 | 9.44 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 25 | 9.44 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 36 | 9.45 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 81 | 9.51 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 82 | 9.51 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 13 | 20 |
| 90 | 9.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 20 |
| 93 | 9.52 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 120 | 9.53 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 138 | 9.54 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 18 |
| 140 | 9.54 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 208 | 9.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 218 | 9.56 | temperature | 25.0 | 4320 | < th | dose independent | no | NA | NA |
| 233 | 9.56 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 240 | 9.56 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 241 | 9.56 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 244 | 9.56 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 254 | 9.57 | temperature | 25.0 | 4320 | > th | dose independent | no | NA | NA |
| 270 | 9.57 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 274 | 9.57 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 23 |
| 314 | 9.58 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 327 | 9.58 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 338 | 9.59 | temperature | 25.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 355 | 9.59 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 359 | 9.59 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 371 | 9.59 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 12 |
| 398 | 9.60 | temperature | 25.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 399 | 9.60 | temperature | 25.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 404 | 9.60 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 14 | 12 |
| 432 | 9.60 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 436 | 9.60 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 437 | 9.60 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 443 | 9.60 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 460 | 9.60 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 477 | 9.60 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 506 | 9.61 | temperature | 25.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 514 | 9.61 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 547 | 9.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 551 | 9.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 561 | 9.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 572 | 9.61 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 12 |
| 670 | 9.61 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 673 | 9.62 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 674 | 9.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 852 | 9.63 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 891 | 9.63 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |